Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 2.3e-87 325.5 159 100.0
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 2.6e-86 322.0 159 98.7
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 6.1e-64 247.7 155 78.1
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.3e-61 240.0 165 72.1
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 5.4e-60 234.6 161 72.0
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 5.4e-60 234.6 163 71.2
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 5.4e-60 234.6 160 70.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.7e-59 232.3 161 73.9
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 7.7e-59 230.7 163 70.6
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 6.6e-58 227.6 161 72.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 9.5e-57 223.8 157 68.2
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 6.1e-56 221.1 159 71.1
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 8.9e-55 217.2 155 69.7
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 8.9e-55 217.2 151 72.2
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.4e-54 214.9 153 69.9
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.2e-53 212.6 152 70.4
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.9e-53 212.2 158 67.7
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 4.9e-53 211.5 152 69.7
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 6.3e-53 211.1 153 69.3
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 6.3e-53 211.1 159 68.6
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 8.3e-53 210.7 152 69.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 8.3e-53 210.7 155 69.0
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.1e-52 210.3 163 65.6
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 2.4e-52 209.1 163 67.5
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 5.4e-52 208.0 155 67.1
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 7.0e-52 207.6 161 62.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 9.2e-52 207.2 145 72.4
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 9.2e-52 207.2 156 65.4
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 9.2e-52 207.2 158 65.8
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.6e-51 206.5 153 68.0
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 2.0e-51 206.1 163 65.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.7e-51 205.7 154 68.2
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 7.8e-51 204.1 155 66.5
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 7.8e-51 204.1 155 66.5
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.0e-50 203.8 158 63.9
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.3e-50 203.4 155 65.8
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-50 203.4 156 66.0
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.3e-50 203.4 161 66.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.7e-50 203.0 159 68.6
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.3e-50 202.6 153 65.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.9e-49 199.5 149 68.5
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 3.3e-49 198.7 159 65.4
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 4.3e-49 198.4 145 66.2
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.2e-48 196.8 146 65.1
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.6e-48 196.4 150 65.3
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 6.2e-48 194.5 207 52.7
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 6.2e-48 194.5 164 59.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 8.0e-48 194.1 159 67.9
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.4e-47 193.4 151 62.3
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 5.2e-47 191.4 150 62.7
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 6.8e-47 191.0 189 55.6
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.2e-46 190.3 162 63.0
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.2e-46 190.3 154 64.3
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.0e-46 189.5 144 68.8
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.0e-46 189.5 142 69.0
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.4e-46 188.7 140 64.3
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 4.4e-46 188.3 151 61.6
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 5.8e-46 188.0 151 60.3
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 5.8e-46 188.0 152 61.8
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 5.8e-46 188.0 152 61.8
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 7.5e-46 187.6 151 61.6
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 9.8e-46 187.2 152 61.2
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 4.9e-45 184.9 156 58.3
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 8.3e-45 184.1 156 59.6
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 8.3e-45 184.1 164 54.9
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.1e-44 183.7 152 60.5
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.4e-44 183.3 141 62.4
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 5.4e-44 181.4 154 62.3
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 7.0e-44 181.0 153 61.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 9.2e-44 180.6 158 58.9
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.2e-43 180.3 161 57.8
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.6e-43 179.9 150 59.3
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.0e-42 177.2 144 61.1
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.7e-42 176.4 150 62.0
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.7e-42 176.4 157 58.0
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 5.0e-42 174.9 158 57.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 8.6e-42 174.1 142 59.9
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.9e-41 172.9 141 63.1
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 9.5e-41 170.6 151 58.9
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 9.5e-41 170.6 155 57.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.6e-40 169.9 144 61.8
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.1e-39 165.6 144 57.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.2e-37 159.5 147 53.1
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 5.2e-31 138.3 131 55.0
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 3.4e-30 135.6 166 45.8
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 7.1e-28 127.9 113 54.9
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 7.3e-25 117.9 143 42.7
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.7e-24 115.2 97 55.7
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 8.1e-24 114.4 136 41.9
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 4.4e-22 108.6 68 79.4
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.7e-19 99.4 95 52.6
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.6e-16 89.0 68 64.7
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 2.6e-14 82.8 71 56.3
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 6.4e-13 78.2 79 50.6
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 6.4e-13 78.2 79 50.6
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 6.6e-10 68.2 61 52.5
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 8.7e-10 67.8 105 35.2
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 2.8e-08 62.8 64 51.6


User provided reference genes

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