Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-55 219.2 119 100.0
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 6.2e-53 210.7 118 97.5
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.9e-50 201.8 119 92.4
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-50 201.4 128 89.1
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-48 195.7 111 94.6
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-46 188.3 107 93.5
arahy.Tifrunner.gnm1.ann1.VK8Z6X Arachis hypogaea HOM05D008215 ORTHO05D004366 5.6e-46 187.6 118 89.0
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-45 185.7 108 91.7
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 3.6e-45 184.9 99 98.0
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 8.1e-45 183.7 100 95.0
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-44 183.3 99 97.0
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 4.0e-44 181.4 103 94.2
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-43 179.5 99 96.0
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-42 176.4 99 93.9
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.4e-42 174.1 99 92.9
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 8.4e-42 173.7 100 91.0
arahy.Tifrunner.gnm1.ann1.XH4RCS Arachis hypogaea HOM05D008215 ORTHO05D004366 5.4e-41 171.0 96 97.9
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 7.1e-41 170.6 97 95.9
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 9.3e-41 170.2 97 94.8
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 9.3e-41 170.2 97 94.8
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 9.3e-41 170.2 91 94.5
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 2.7e-40 168.7 97 94.8
arahy.Tifrunner.gnm1.ann1.RJ0BEJ Arachis hypogaea HOM05D008215 ORTHO05D004366 7.9e-40 167.2 97 94.8
arahy.Tifrunner.gnm1.ann1.N6DDSD Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-39 164.1 95 94.7
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-36 156.8 116 76.7
arahy.Tifrunner.gnm1.ann1.QL13TW Arachis hypogaea HOM05D008215 ORTHO05D004366 5.3e-36 154.5 86 97.7
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 6.9e-36 154.1 97 87.6
arahy.Tifrunner.gnm1.ann1.J7IPJF Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-35 153.3 86 97.7
arahy.Tifrunner.gnm1.ann1.N8KI2G Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-35 153.3 86 97.7
arahy.Tifrunner.gnm1.ann1.AZ2039 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-35 151.8 86 96.5
arahy.Tifrunner.gnm1.ann1.PGWD8S Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-35 151.8 86 96.5
arahy.Tifrunner.gnm1.ann1.X4FCWR Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-35 151.8 86 95.3
arahy.Tifrunner.gnm1.ann1.53FFQK Arachis hypogaea HOM05D008215 ORTHO05D004366 5.8e-35 151.0 86 96.5
arahy.Tifrunner.gnm1.ann1.AKXA3Q Arachis hypogaea HOM05D008215 ORTHO05D004366 7.6e-35 150.6 86 95.3
arahy.Tifrunner.gnm1.ann1.VI83PH Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-34 150.2 86 95.3
arahy.Tifrunner.gnm1.ann1.C7S3TB Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-34 149.4 86 95.3
arahy.Tifrunner.gnm1.ann1.R9U7QG Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-34 149.4 86 93.0
arahy.Tifrunner.gnm1.ann1.06KY74 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-34 149.1 86 95.3
arahy.Tifrunner.gnm1.ann1.4R5VT1 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-34 148.3 86 94.2
arahy.Tifrunner.gnm1.ann1.NAL5BM Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-34 148.3 86 94.2
arahy.Tifrunner.gnm1.ann1.06JWCS Arachis hypogaea HOM05D008215 ORTHO05D004366 4.9e-34 147.9 86 94.2
arahy.Tifrunner.gnm1.ann1.72L17L Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-33 146.0 86 93.0
arahy.Tifrunner.gnm1.ann1.GGCI06 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-33 144.8 86 93.0
arahy.Tifrunner.gnm1.ann1.1L25KB Arachis hypogaea HOM05D008215 ORTHO05D012964 1.2e-32 143.3 91 84.6
arahy.Tifrunner.gnm1.ann1.ZA5TXM Arachis hypogaea HOM05D008215 ORTHO05D004366 2.7e-32 142.1 86 91.9
arahy.Tifrunner.gnm1.ann1.EFLB64 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.5e-32 141.7 86 90.7
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-31 137.1 119 70.6
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.3e-30 134.8 119 69.7
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 9.6e-30 133.7 118 68.6
arahy.Tifrunner.gnm1.ann1.0B2DCJ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-27 126.3 68 95.6
arahy.Tifrunner.gnm1.ann1.IYQ4QW Arachis hypogaea HOM05D008215 ORTHO05D004366 2.0e-27 125.9 68 95.6
arahy.Tifrunner.gnm1.ann1.BH3K81 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-26 123.6 68 94.1
arahy.Tifrunner.gnm1.ann1.KS76FR Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-26 123.2 68 94.1
arahy.Tifrunner.gnm1.ann1.TNWQ22 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.5e-26 120.9 68 92.6
arahy.Tifrunner.gnm1.ann1.Q5FG1U Arachis hypogaea HOM05D008215 ORTHO05D004366 1.4e-25 119.8 68 92.6
arahy.Tifrunner.gnm1.ann1.0NID34 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-25 119.4 68 91.2
arahy.Tifrunner.gnm1.ann1.65QQ6U Arachis hypogaea HOM05D008215 ORTHO05D004366 2.5e-25 119.0 68 91.2
arahy.Tifrunner.gnm1.ann1.WUU67S Arachis hypogaea HOM05D008215 ORTHO05D004366 2.5e-25 119.0 68 91.2
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 7.2e-25 117.5 102 67.6
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-24 116.7 102 66.7
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 4.6e-24 114.8 102 65.7
arahy.Tifrunner.gnm1.ann1.Y4Q1DU Arachis hypogaea HOM05D008215 ORTHO05D012964 7.9e-24 114.0 92 78.3
arahy.Tifrunner.gnm1.ann1.V6LEH2 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.3e-22 108.2 82 75.6
arahy.Tifrunner.gnm1.ann1.QN60Y2 Arachis hypogaea HOM05D008215 ORTHO05D087623 2.8e-21 105.5 55 98.2
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.8e-20 102.8 105 56.2
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.1e-20 102.1 105 57.1
arahy.Tifrunner.gnm1.ann1.Y6ARBS Arachis hypogaea HOM05D008215 ORTHO05D004366 4.1e-20 101.7 60 90.0
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 5.3e-20 101.3 105 57.1
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 6.9e-20 100.9 101 60.4
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.7e-18 96.3 105 54.3
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 5.0e-18 94.7 107 57.0
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 8.5e-18 94.0 105 54.3
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 7.2e-17 90.9 105 52.4
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-16 90.1 91 59.3
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.2e-16 90.1 106 52.8
arahy.Tifrunner.gnm1.ann1.LIW0MX Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-16 89.7 50 92.0
arahy.Tifrunner.gnm1.ann1.F39Z70 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-16 89.4 50 90.0
arahy.Tifrunner.gnm1.ann1.7E0SBW Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-15 87.0 71 73.2
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.8e-15 86.3 104 53.8
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.8e-15 86.3 104 53.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 2.5e-14 82.4 106 50.0
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 4.8e-13 78.2 106 47.2
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 6.3e-13 77.8 100 48.0
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 1.1e-12 77.0 106 45.3
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.8e-12 76.3 105 43.8
arahy.Tifrunner.gnm1.ann1.NS8G5U Arachis hypogaea HOM05D008215 ORTHO05D004366 5.3e-12 74.7 67 68.7
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 6.9e-12 74.3 106 44.3
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 6.9e-12 74.3 106 41.5
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.2e-11 73.6 105 44.8
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 3.4e-11 72.0 105 41.9
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.0e-10 70.5 106 39.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.3e-10 70.1 106 44.3
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.7e-10 69.7 106 41.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.9e-10 68.9 103 42.7
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 3.8e-10 68.6 106 42.5
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 3.8e-10 68.6 106 42.5
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 5.0e-10 68.2 106 43.4
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.1e-09 67.0 105 41.0
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.1e-09 67.0 105 41.0
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.4e-09 66.6 102 43.1
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.4e-09 66.6 106 40.6
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 5.5e-09 64.7 102 41.2
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 7.2e-09 64.3 109 44.0
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 7.2e-09 64.3 102 43.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 1.2e-08 63.5 106 39.6
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 2.1e-08 62.8 106 39.6
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.1e-08 62.8 108 43.5
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 2.7e-08 62.4 105 40.0
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.6e-08 62.0 104 40.4
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 6.1e-08 61.2 109 40.4
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 7.9e-08 60.8 112 39.3
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 1.0e-07 60.5 104 39.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 1.0e-07 60.5 105 40.0
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.4e-07 60.1 100 40.0
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.4e-07 60.1 104 44.2
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.4e-07 60.1 105 39.0
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.8e-07 59.7 105 40.0
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 3.0e-07 58.9 105 38.1
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 3.0e-07 58.9 102 39.2
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 5.1e-07 58.2 106 36.8
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 5.1e-07 58.2 101 38.6
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 8.8e-07 57.4 103 37.9
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 8.8e-07 57.4 101 39.6
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 8.8e-07 57.4 105 38.1
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 1.1e-06 57.0 108 34.3
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-06 57.0 105 38.1
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.5e-06 56.6 105 35.2
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 2.6e-06 55.8 102 38.2
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.6e-06 55.8 102 38.2
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 3.3e-06 55.5 77 42.9
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 3.3e-06 55.5 107 36.4
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 4.4e-06 55.1 89 38.2
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 5.7e-06 54.7 106 34.9
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 5.7e-06 54.7 105 37.1
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 5.7e-06 54.7 101 37.6
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 7.4e-06 54.3 88 38.6
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 7.4e-06 54.3 101 37.6
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 9.7e-06 53.9 108 37.0


User provided reference genes

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