Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.3e-82 309.7 153 100.0
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 6.3e-82 307.4 153 98.7
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 2.9e-79 298.5 148 99.3
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 4.4e-59 231.5 124 88.7
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 2.6e-51 205.7 113 86.7
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 5.7e-43 177.9 121 68.6
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 7.5e-43 177.6 122 70.5
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 1.3e-42 176.8 112 72.3
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.7e-42 176.4 121 66.1
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 1.7e-42 176.4 121 66.9
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 2.8e-42 175.6 120 67.5
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 3.7e-42 175.3 123 68.3
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 3.7e-42 175.3 125 60.8
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 4.9e-42 174.9 113 70.8
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 6.3e-42 174.5 113 69.9
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 1.1e-41 173.7 121 66.1
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 1.1e-41 173.7 113 69.9
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 1.4e-41 173.3 121 65.3
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 1.8e-41 172.9 121 65.3
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 2.4e-41 172.6 121 64.5
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 2.4e-41 172.6 113 69.0
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 3.1e-41 172.2 121 62.0
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 3.1e-41 172.2 121 64.5
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 3.1e-41 172.2 127 64.6
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 4.1e-41 171.8 121 62.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 5.4e-41 171.4 113 68.1
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 5.4e-41 171.4 124 63.7
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 7.0e-41 171.0 162 54.9
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 1.2e-40 170.2 133 59.4
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 1.6e-40 169.9 113 71.7
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.6e-40 169.9 131 61.1
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 1.6e-40 169.9 124 62.9
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 2.0e-40 169.5 124 61.3
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 2.0e-40 169.5 132 59.8
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 2.0e-40 169.5 113 69.0
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 2.7e-40 169.1 113 69.0
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 4.5e-40 168.3 114 66.7
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 4.5e-40 168.3 113 67.3
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 5.9e-40 167.9 132 59.8
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 5.9e-40 167.9 113 69.0
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 7.7e-40 167.5 124 63.7
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 1.0e-39 167.2 113 68.1
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 1.0e-39 167.2 121 62.0
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 1.0e-39 167.2 113 66.4
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 1.3e-39 166.8 128 61.7
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 1.3e-39 166.8 124 62.9
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 1.7e-39 166.4 123 63.4
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 1.7e-39 166.4 121 60.3
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 2.3e-39 166.0 125 61.6
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 2.3e-39 166.0 124 60.5
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 2.9e-39 165.6 125 60.8
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 2.9e-39 165.6 144 56.9
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 3.8e-39 165.2 121 62.0
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 3.8e-39 165.2 113 66.4
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 6.6e-39 164.5 124 61.3
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 8.6e-39 164.1 128 60.9
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 1.1e-38 163.7 124 57.3
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 1.9e-38 162.9 127 61.4
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 2.5e-38 162.5 113 64.6
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 5.6e-38 161.4 121 59.5
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 5.6e-38 161.4 115 66.1
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 7.3e-38 161.0 113 65.5
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 9.5e-38 160.6 113 64.6
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 9.5e-38 160.6 115 66.1
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 1.2e-37 160.2 118 64.4
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 1.6e-37 159.8 145 53.8
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 2.1e-37 159.5 138 57.2
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.1e-37 159.5 122 61.5
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.8e-37 159.1 122 60.7
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 2.8e-37 159.1 122 60.7
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 4.7e-37 158.3 117 62.4
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 6.1e-37 157.9 148 53.4
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 8.0e-37 157.5 135 54.8
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.8e-36 156.4 137 56.9
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 4.0e-36 155.2 108 65.7
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 1.2e-35 153.7 122 59.0
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 2.0e-35 152.9 121 58.7
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 2.6e-35 152.5 120 57.5
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 4.4e-35 151.8 124 57.3
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 1.3e-34 150.2 124 58.9
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 2.2e-34 149.4 128 57.8
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 7.0e-33 144.4 146 50.0
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 7.0e-33 144.4 133 55.6
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 3.5e-32 142.1 131 50.4
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 3.9e-31 138.7 108 61.1
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 1.1e-30 137.1 126 55.6
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 3.3e-30 135.6 123 57.7
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 9.5e-30 134.0 123 56.1
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 2.1e-29 132.9 124 53.2
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.4e-28 130.2 90 66.7
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 6.8e-28 127.9 91 63.7
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 6.8e-28 127.9 91 63.7
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 8.9e-28 127.5 90 65.6
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 8.9e-28 127.5 92 63.0
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 2.0e-27 126.3 91 62.6
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 2.6e-27 125.9 120 50.0
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 3.4e-27 125.6 94 62.8
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 5.8e-27 124.8 125 53.6
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 9.8e-27 124.0 91 62.6
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 9.8e-27 124.0 91 62.6
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 2.2e-26 122.9 91 62.6
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 3.7e-26 122.1 132 49.2
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 2.0e-24 116.3 83 63.9
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 6.0e-24 114.8 57 96.5
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 3.3e-22 109.0 79 64.6
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 4.0e-20 102.1 89 57.3
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 1.3e-18 97.1 126 38.9
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 1.1e-17 94.0 113 42.5
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 5.4e-17 91.7 56 75.0
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 1.6e-16 90.1 57 70.2
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 6.6e-15 84.7 57 63.2
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 9.5e-14 80.9 58 58.6
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 1.2e-13 80.5 56 62.5
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.2e-13 80.5 115 40.9
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.2e-13 80.5 115 40.9
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 2.1e-13 79.7 37 91.9
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 6.2e-13 78.2 56 62.5
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 6.2e-13 78.2 62 58.1
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 1.1e-12 77.4 56 60.7
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.4e-12 77.0 65 60.0
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 5.2e-12 75.1 67 52.2
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 6.8e-12 74.7 45 68.9
HPP92_011638 Vanilla planifolia HOM05D006099 ORTHO05D007317 2.6e-11 72.8 42 71.4
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 9.9e-11 70.9 112 36.6
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 2.7e-08 62.8 83 43.4


User provided reference genes

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