Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb310140 Zea mays HOM05D007041 ORTHO05D008036 3.4e-55 218.4 134 100.0
Zm00001eb441140 Zea mays HOM05D007041 ORTHO05D008036 3.4e-55 218.4 134 100.0
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 6.8e-08 61.2 50 54.0
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 6.8e-08 61.2 50 50.0
HPP92_007621 Vanilla planifolia HOM05D007041 ORTHO05D008036 6.8e-08 61.2 48 58.3
Os01g0656300 Oryza sativa ssp. japonica HOM05D007041 ORTHO05D008036 8.9e-08 60.8 42 69.0
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 1.2e-07 60.5 38 68.4
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 1.2e-07 60.5 44 54.5
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.0e-07 59.7 44 52.3
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.0e-07 59.7 46 54.3
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.6e-07 59.3 41 56.1
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.6e-07 59.3 49 49.0
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 2.6e-07 59.3 47 51.1
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 2.6e-07 59.3 47 51.1
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 2.6e-07 59.3 52 48.1
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 5.8e-07 58.2 36 66.7
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 5.8e-07 58.2 42 54.8
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 5.8e-07 58.2 37 64.9
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 7.6e-07 57.8 46 52.2
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 7.6e-07 57.8 39 53.8
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 7.6e-07 57.8 44 56.8
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 9.9e-07 57.4 42 54.8
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 9.9e-07 57.4 48 50.0
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 9.9e-07 57.4 48 50.0
HPP92_005512 Vanilla planifolia HOM05D007041 ORTHO05D008036 1.7e-06 56.6 49 46.9
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 2.2e-06 56.2 49 49.0
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.2e-06 56.2 47 53.2
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.2e-06 56.2 47 53.2
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 2.2e-06 56.2 47 53.2
Potri.002G168300 Populus trichocarpa HOM05D007041 ORTHO05D008036 2.2e-06 56.2 47 55.3
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 2.2e-06 56.2 38 60.5
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 2.2e-06 56.2 38 57.9
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 2.9e-06 55.8 46 47.8
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.9e-06 55.8 44 56.8
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.9e-06 55.8 48 47.9
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.9e-06 55.8 48 50.0
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.9e-06 55.8 48 50.0
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 2.9e-06 55.8 40 47.5
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.9e-06 55.8 39 53.8
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.9e-06 55.8 39 53.8
Nitab4.5_0004161g0040 Nicotiana tabacum HOM05D007041 ORTHO05D008036 3.8e-06 55.5 51 47.1
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 3.8e-06 55.5 38 52.6
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 3.8e-06 55.5 45 46.7
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 3.8e-06 55.5 39 56.4
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.9e-06 55.1 48 47.9
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 4.9e-06 55.1 46 50.0
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 6.4e-06 54.7 86 34.9
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 8.4e-06 54.3 41 48.8
RcHm_v2.0_Chr7g0195411 Rosa chinensis HOM05D017100 ORTHO05D008036 8.4e-06 54.3 47 55.3
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 8.4e-06 54.3 40 52.5


User provided reference genes

Program Settings