Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb440480 Zea mays HOM05D000504 ORTHO05D000403 4.8e-146 521.2 265 100.0
Zm00001eb439650 Zea mays HOM05D000504 ORTHO05D000403 1.6e-45 187.2 291 47.8
Zm00001eb360520 Zea mays HOM05D000504 ORTHO05D000403 1.3e-42 177.6 372 40.1
Os01g0685900 Oryza sativa ssp. japonica HOM05D000504 ORTHO05D000403 1.6e-29 134.0 370 34.6
Os05g0552900 Oryza sativa ssp. japonica HOM05D000504 ORTHO05D000403 3.4e-19 99.8 362 30.4
Zm00001eb156480 Zea mays HOM05D000504 ORTHO05D000403 6.9e-12 75.5 39 94.9
Zm00001eb024170 Zea mays HOM05D000504 ORTHO05D000403 1.2e-11 74.7 40 90.0
Zm00001eb027330 Zea mays HOM05D000504 ORTHO05D000403 2.2e-10 70.5 39 89.7
FvH4_7g28190 Fragaria vesca HOM05D000504 ORTHO05D000403 1.1e-09 68.2 380 28.7
FAN06G1705 Fragaria x ananassa HOM05D000504 ORTHO05D000403 1.1e-09 68.2 380 28.7
FAN06G4803 Fragaria x ananassa HOM05D000504 ORTHO05D000403 1.1e-09 68.2 380 28.7
Zm00001eb016050 Zea mays HOM05D000504 ORTHO05D000403 1.4e-09 67.8 38 84.2
Zm00001eb024940 Zea mays HOM05D000504 ORTHO05D000403 1.4e-09 67.8 38 84.2
Zm00001eb393600 Zea mays HOM05D000504 ORTHO05D000403 1.4e-09 67.8 38 84.2
Zm00001eb389170 Zea mays HOM05D000504 ORTHO05D000403 2.1e-08 63.9 107 40.2
Ciclev10004422m.g Citrus clementina HOM05D000504 ORTHO05D000403 6.1e-08 62.4 416 26.7
Duzib068G1114 Durio zibethinus HOM05D000504 ORTHO05D000403 7.9e-08 62.0 413 26.4
Manes.13G078039 Manihot esculenta HOM05D000504 ORTHO05D000403 1.8e-07 60.8 380 26.3
Oeu022506.1 Olea europaea HOM05D000504 ORTHO05D000403 3.0e-07 60.1 199 30.7
Psat6g112680 Pisum sativum HOM05D000504 ORTHO05D000403 3.9e-07 59.7 199 32.2
FAN10G2356 Fragaria x ananassa HOM05D000504 ORTHO05D000403 6.7e-07 58.9 199 30.7
FAN01G0639 Fragaria x ananassa HOM05D000504 ORTHO05D000403 8.8e-07 58.5 373 27.1
FAN03G2257 Fragaria x ananassa HOM05D000504 ORTHO05D000403 1.1e-06 58.2 199 30.7
FAN03G2477 Fragaria x ananassa HOM05D000504 ORTHO05D000403 1.1e-06 58.2 199 30.7
MD07G1257900 Malus domestica HOM05D000504 ORTHO05D000403 1.1e-06 58.2 392 28.1
Medtr1g076700 Medicago truncatula HOM05D000504 ORTHO05D000403 1.1e-06 58.2 199 32.2
Phvul.007G111500 Phaseolus vulgaris HOM05D000504 ORTHO05D000403 1.1e-06 58.2 199 31.7
VMungo0720G2133 Vigna mungo HOM05D000504 ORTHO05D000403 1.1e-06 58.2 199 30.7
arahy.Tifrunner.gnm1.ann1.ASBV53 Arachis hypogaea HOM05D000504 ORTHO05D000403 1.5e-06 57.8 199 29.6
arahy.Tifrunner.gnm1.ann1.L32ZBM Arachis hypogaea HOM05D000504 ORTHO05D000403 1.5e-06 57.8 199 29.6
Glyma.20G212100 Glycine max HOM05D000504 ORTHO05D000403 1.5e-06 57.8 199 32.7
Lalb_Chr02g0149941 Lupinus albus HOM05D000504 ORTHO05D000403 1.5e-06 57.8 410 25.4
TPR.G16634 Trifolium pratense HOM05D000504 ORTHO05D000403 1.5e-06 57.8 199 32.2
RcHm_v2.0_Chr1g0375141 Rosa chinensis HOM05D000504 ORTHO05D000403 2.0e-06 57.4 377 28.9
Ca_09892_v3 Cicer arietinum L. HOM05D000504 ORTHO05D000403 2.6e-06 57.0 199 30.7
MELO3C005420.2 Cucumis melo HOM05D000504 ORTHO05D000403 2.6e-06 57.0 199 30.2
Potri.015G131400 Populus trichocarpa HOM05D000504 ORTHO05D000403 2.6e-06 57.0 199 28.6
HPP92_004551 Vanilla planifolia HOM05D000504 ORTHO05D000403 2.6e-06 57.0 382 27.0
Atru.chr1.633 Acer truncatum HOM05D000504 ORTHO05D000403 3.3e-06 56.6 199 29.6
TAR374G0403 Trochodendron aralioides HOM05D000504 ORTHO05D000403 3.3e-06 56.6 200 28.0
Cfa008233 Carpinus fangiana HOM05D000504 ORTHO05D000403 4.4e-06 56.2 199 30.7
Eucgr.A02875 Eucalyptus grandis HOM05D000504 ORTHO05D000403 4.4e-06 56.2 199 30.2
Lj5g0027503 Lotus japonicus HOM05D000504 ORTHO05D000403 4.4e-06 56.2 199 31.7
MBI04_g20745_MAGBIO Magnolia biondii HOM05D000504 ORTHO05D000403 5.7e-06 55.8 200 29.0
Glyma.10G178100 Glycine max HOM05D000504 ORTHO05D000403 7.4e-06 55.5 199 31.7
PGR042G0372 Punica granatum HOM05D000504 ORTHO05D000403 7.4e-06 55.5 199 27.1
ATR0810G006 Amborella trichopoda HOM05D000504 ORTHO05D000403 9.7e-06 55.1 415 25.5
TWI23G0479 Tripterygium wilfordii HOM05D000504 ORTHO05D000403 9.7e-06 55.1 199 31.7


User provided reference genes

Program Settings