Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 7.3e-60 233.8 127 100.0
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 8.7e-37 157.1 123 69.9
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 1.5e-12 76.6 118 39.0
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 9.1e-10 67.4 122 32.8
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.5e-09 66.6 103 35.0
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 2.6e-09 65.9 90 40.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 2.6e-09 65.9 100 41.0
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 3.4e-09 65.5 84 44.0
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 3.4e-09 65.5 126 35.7
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 3.4e-09 65.5 93 41.9
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 4.5e-09 65.1 78 46.2
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 4.5e-09 65.1 115 36.5
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 4.5e-09 65.1 100 40.0
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 4.5e-09 65.1 123 36.6
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 5.9e-09 64.7 93 40.9
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 7.7e-09 64.3 93 40.9
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 1.0e-08 63.9 90 41.1
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 1.3e-08 63.5 111 36.9
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.3e-08 63.5 93 45.2
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 1.7e-08 63.2 89 40.4
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.7e-08 63.2 93 38.7
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 2.9e-08 62.4 122 34.4
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 3.8e-08 62.0 93 38.7
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 5.0e-08 61.6 123 35.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 1.1e-07 60.5 93 40.9
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.1e-07 60.5 81 40.7
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 1.1e-07 60.5 110 38.2
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 1.9e-07 59.7 109 35.8
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 4.2e-07 58.5 112 35.7
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 4.2e-07 58.5 81 39.5
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 7.2e-07 57.8 81 39.5
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 9.4e-07 57.4 110 37.3
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 9.4e-07 57.4 110 33.6
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.6e-06 56.6 96 37.5
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.6e-06 56.6 81 38.3
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 2.1e-06 56.2 93 34.4
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 2.7e-06 55.8 116 33.6
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 2.7e-06 55.8 108 34.3
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 4.7e-06 55.1 124 33.9
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 4.7e-06 55.1 123 35.8


User provided reference genes

Program Settings