Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 6.3e-166 587.4 307 100.0
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 8.1e-81 304.7 233 64.4
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 1.8e-80 303.5 224 64.3
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 2.4e-80 303.1 241 63.1
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.5e-79 300.4 213 65.7
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.5e-79 300.4 213 65.7
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 3.4e-79 299.3 245 60.4
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 4.5e-79 298.9 213 66.7
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 5.8e-79 298.5 213 66.2
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 7.6e-79 298.1 211 65.9
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 1.7e-78 297.0 238 62.2
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 2.9e-78 296.2 213 68.5
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.1e-77 294.3 244 59.0
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.5e-77 293.1 244 58.6
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 2.5e-77 293.1 229 62.0
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 4.2e-77 292.4 213 66.7
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 7.1e-77 291.6 216 65.3
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.1e-76 290.0 239 60.3
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 2.7e-76 289.7 219 63.9
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 3.5e-76 289.3 213 65.3
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 6.0e-76 288.5 219 63.0
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.3e-75 287.3 216 63.9
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 2.3e-75 286.6 241 59.8
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.3e-75 286.6 221 63.3
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 2.3e-75 286.6 235 58.7
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 3.0e-75 286.2 228 61.8
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 3.9e-75 285.8 258 56.2
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 6.7e-75 285.0 227 59.0
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 8.7e-75 284.6 231 60.2
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.1e-74 284.3 213 63.8
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.5e-74 283.9 215 63.7
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 1.9e-74 283.5 215 63.7
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.9e-74 283.5 213 62.9
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 2.5e-74 283.1 219 62.1
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 3.3e-74 282.7 228 60.1
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.3e-74 282.7 213 63.4
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 3.3e-74 282.7 213 62.9
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 4.3e-74 282.3 239 56.5
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 4.3e-74 282.3 217 62.2
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 5.7e-74 282.0 212 61.8
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 5.7e-74 282.0 212 63.2
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.3e-73 280.8 237 58.2
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 1.3e-73 280.8 238 58.4
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.3e-73 280.8 238 58.4
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.6e-73 280.4 212 62.3
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.6e-73 280.4 228 59.6
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 2.1e-73 280.0 213 63.4
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 2.8e-73 279.6 227 58.6
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 3.7e-73 279.3 240 59.2
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 3.7e-73 279.3 237 56.5
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 6.3e-73 278.5 211 62.6
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 8.2e-73 278.1 211 63.5
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 8.2e-73 278.1 243 57.6
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 1.4e-72 277.3 211 61.6
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 2.4e-72 276.6 219 60.7
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 1.2e-71 274.2 237 58.6
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 2.0e-71 273.5 209 63.2
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 3.4e-71 272.7 209 60.8
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 5.9e-71 271.9 213 61.5
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.0e-70 271.2 216 62.0
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.0e-70 271.2 198 62.6
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.3e-70 270.8 220 62.3
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.3e-70 270.8 194 66.5
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 2.2e-70 270.0 204 63.2
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 2.9e-70 269.6 186 68.8
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 3.8e-70 269.2 195 67.7
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 5.0e-70 268.9 213 59.6
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 5.5e-69 265.4 244 55.7
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 5.5e-69 265.4 195 67.2
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 2.7e-68 263.1 215 58.6
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 3.6e-68 262.7 215 57.7
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 4.6e-68 262.3 196 61.2
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 1.3e-67 260.8 212 61.3
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 3.3e-66 256.1 319 46.1
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 3.3e-66 256.1 212 57.5
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 7.4e-66 255.0 213 58.2
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 6.3e-65 251.9 229 54.6
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 6.3e-65 251.9 209 57.9
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 8.2e-65 251.5 262 52.3
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 9.1e-64 248.1 287 47.7
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.2e-63 247.7 211 53.1
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 3.4e-63 246.1 212 54.2
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.3e-62 244.2 208 57.2
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.2e-61 239.6 201 55.2
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 3.2e-61 239.6 213 55.9
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 4.2e-61 239.2 209 56.5
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 7.2e-61 238.4 338 42.9
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 4.6e-60 235.7 174 64.4
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 1.4e-59 234.2 176 61.9
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 6.7e-59 231.9 193 56.0
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 9.7e-58 228.0 208 52.9
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 4.1e-56 222.6 212 53.8
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 1.4e-53 214.2 210 50.5
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.9e-53 213.8 186 52.2
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 8.8e-51 204.9 175 53.7
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 4.4e-50 202.6 210 51.4
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 7.4e-50 201.8 252 46.0
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 7.4e-50 201.8 252 46.0
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 1.8e-48 197.2 217 47.5
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 4.5e-47 192.6 214 48.6
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 1.0e-46 191.4 163 54.0
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.9e-45 187.2 144 59.0
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 2.1e-44 183.7 122 65.6
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 3.7e-41 172.9 170 52.9
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 8.2e-41 171.8 146 52.7
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.0e-38 164.9 144 54.2
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 5.0e-38 162.5 214 40.7
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 1.6e-36 157.5 197 43.1
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 3.1e-32 143.3 102 60.8
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 3.1e-32 143.3 250 38.0
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.8e-27 127.5 83 72.3
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 3.0e-27 126.7 230 35.7
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 4.0e-27 126.3 83 72.3
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 8.3e-25 118.6 87 62.1
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 2.3e-22 110.5 69 75.4
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 7.5e-18 95.5 148 37.2
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.1e-16 91.7 62 71.0
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 1.4e-16 91.3 172 30.8
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 1.6e-15 87.8 177 33.3
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 8.3e-09 65.5 48 64.6
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 1.2e-07 61.6 47 55.3


User provided reference genes

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