Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 0.0e+00 1184.1 621 100.0
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 3.8e-202 708.8 399 88.7
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 4.8e-173 612.1 584 64.0
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 5.5e-153 545.4 299 89.3
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 4.7e-120 436.0 222 95.5
Zm00001eb065700 Zea mays HOM05D019859 ORTHO05D008940 2.7e-43 181.0 121 79.3
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.8e-35 154.5 461 31.0
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 4.0e-34 150.6 520 31.7
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 2.6e-33 147.9 659 28.8
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 5.7e-33 146.7 475 32.8
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 8.3e-32 142.9 530 30.2
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.4e-31 142.1 639 28.5
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.8e-31 141.7 512 31.2
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 2.9e-29 134.4 496 30.4
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 1.1e-28 132.5 675 27.9
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.3e-28 130.6 469 30.1
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 9.5e-28 129.4 541 27.2
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 9.5e-28 129.4 504 30.4
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 1.6e-27 128.6 539 27.1
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 2.8e-27 127.9 486 28.8
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 2.8e-27 127.9 585 27.4
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 4.7e-27 127.1 491 30.3
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 4.0e-26 124.0 474 28.5
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 5.2e-26 123.6 456 30.0
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 6.8e-26 123.2 475 29.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 6.8e-26 123.2 615 27.2
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 3.4e-25 120.9 503 29.0
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 4.4e-25 120.6 470 27.7
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.9e-24 117.9 482 28.4
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.7e-24 117.5 625 25.6
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 4.9e-24 117.1 471 29.7
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 4.9e-24 117.1 474 27.8
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.9e-23 115.2 568 27.3
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.9e-23 115.2 485 26.8
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 5.4e-23 113.6 485 26.2
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 9.2e-23 112.8 635 26.3
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 9.2e-23 112.8 470 27.2
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.6e-22 112.1 490 26.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 1.0e-21 109.4 594 25.9
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 1.3e-21 109.0 483 25.9
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.7e-21 108.6 600 26.8
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 5.0e-21 107.1 675 25.8
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 8.6e-21 106.3 646 25.9
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 8.6e-21 106.3 641 26.8
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.5e-20 105.5 674 24.2
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.9e-20 105.1 646 25.7
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.9e-20 105.1 646 25.7
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 1.9e-20 105.1 624 26.6
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 1.9e-20 105.1 509 27.5
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 2.5e-20 104.8 662 25.4
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 2.5e-20 104.8 672 26.3
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.5e-20 104.8 605 28.1
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.8e-19 101.3 555 26.5
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 3.6e-19 100.9 681 24.4
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 8.1e-19 99.8 682 24.8
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 4.0e-18 97.4 609 25.5
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 6.8e-18 96.7 678 26.4
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 1.2e-17 95.9 566 26.1
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 5.8e-17 93.6 487 26.5
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 5.8e-17 93.6 683 23.9
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 7.5e-17 93.2 467 27.4
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 9.8e-17 92.8 460 25.4
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.3e-16 92.4 538 27.7
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.9e-16 91.3 690 24.9
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 8.3e-16 89.7 482 25.3
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 1.1e-15 89.4 467 26.6
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.4e-15 89.0 503 28.8
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 1.9e-15 88.6 484 25.8
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 2.4e-15 88.2 486 25.9
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 3.2e-15 87.8 480 27.5
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 3.2e-15 87.8 567 26.5
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 7.1e-15 86.7 382 25.4
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 7.1e-15 86.7 600 25.8
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 9.2e-15 86.3 380 28.4
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.7e-14 84.7 496 25.8
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 4.6e-14 84.0 663 24.9
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 5.1e-13 80.5 198 33.8
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 8.6e-13 79.7 627 23.4
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 1.1e-12 79.3 678 24.8
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.1e-12 79.3 691 23.2
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.5e-12 78.2 683 24.2
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.3e-12 77.8 407 25.1
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 4.3e-12 77.4 674 24.8
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 7.3e-12 76.6 655 24.9
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 2.8e-11 74.7 387 25.6
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.7e-11 73.9 603 23.5
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.5e-09 68.9 114 40.4
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 2.0e-09 68.6 455 26.4
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 2.6e-09 68.2 391 23.5
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 4.4e-09 67.4 576 26.0
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 9.9e-09 66.2 170 32.9
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 2.2e-08 65.1 303 29.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.2e-08 65.1 499 22.6
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 2.7e-06 58.2 114 36.0
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 2.7e-06 58.2 114 36.0


User provided reference genes

Program Settings