Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 0.0e+00 1270.0 680 100.0
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 7.5e-95 352.4 461 49.0
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.9e-45 188.3 499 35.1
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.1e-43 180.3 509 32.4
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 8.8e-43 179.5 435 34.7
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 3.1e-40 171.0 502 32.5
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.0e-39 168.3 480 32.1
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 7.7e-39 166.4 351 37.0
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 2.2e-38 164.9 490 31.8
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.9e-38 164.5 490 31.8
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.8e-38 164.1 446 33.6
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 5.0e-38 163.7 486 31.5
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 5.0e-38 163.7 468 33.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 2.5e-37 161.4 314 38.5
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 3.2e-37 161.0 506 31.8
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 9.4e-37 159.5 480 32.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.8e-35 155.2 518 30.3
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.8e-35 155.2 399 33.1
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.8e-35 155.2 520 31.2
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.3e-35 154.8 373 33.0
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 3.0e-35 154.5 478 31.4
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 5.1e-35 153.7 408 32.6
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.1e-34 152.5 457 31.9
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.5e-34 152.1 498 31.9
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.5e-34 152.1 509 29.7
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 7.4e-34 149.8 455 31.4
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.7e-34 149.4 399 32.3
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.7e-33 148.7 423 30.7
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 3.7e-33 147.5 449 29.2
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 4.8e-33 147.1 535 30.1
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.4e-32 145.6 431 34.6
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 5.3e-32 143.7 300 36.3
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 7.0e-32 143.3 379 35.4
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 7.0e-32 143.3 453 30.5
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 9.1e-32 142.9 495 29.1
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 9.1e-32 142.9 474 29.7
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.5e-31 142.1 500 31.2
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 4.5e-31 140.6 492 31.9
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.3e-30 139.0 467 30.8
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 2.9e-30 137.9 470 30.9
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 5.0e-30 137.1 469 29.2
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.2e-29 134.4 480 30.6
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 4.2e-29 134.0 540 30.0
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 9.4e-29 132.9 476 31.7
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 9.4e-29 132.9 320 32.8
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.2e-28 132.5 363 32.8
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.6e-28 132.1 386 31.6
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.1e-28 131.7 449 29.0
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 2.1e-28 131.7 449 30.3
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 4.7e-28 130.6 504 29.0
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 4.7e-28 130.6 364 31.9
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 8.0e-28 129.8 480 28.8
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 8.0e-28 129.8 367 31.9
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.8e-27 128.6 475 29.5
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.5e-26 125.6 431 29.7
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 5.7e-26 123.6 392 30.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 5.7e-26 123.6 540 30.4
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 5.7e-26 123.6 446 30.9
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 9.7e-26 122.9 433 30.3
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 6.3e-25 120.2 472 29.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.4e-24 119.0 541 28.7
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.4e-24 119.0 402 29.6
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.4e-24 119.0 430 29.5
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 9.1e-24 116.3 225 36.9
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.0e-23 115.2 346 31.5
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 3.5e-23 114.4 491 29.7
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 7.7e-23 113.2 205 36.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.0e-22 112.8 208 37.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.3e-22 112.5 205 36.1
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.3e-22 112.5 205 36.1
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.7e-22 112.1 449 27.8
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 5.0e-22 110.5 411 29.9
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 6.5e-22 110.2 205 35.6
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 4.2e-21 107.5 423 29.3
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 4.2e-21 107.5 386 28.2
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 5.5e-21 107.1 540 28.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 5.5e-21 107.1 425 28.5
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.1e-20 105.1 361 31.9
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.1e-20 105.1 510 27.8
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 8.0e-20 103.2 577 26.0
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 8.0e-20 103.2 403 27.0
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.0e-19 102.8 498 26.7
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.0e-19 102.8 375 29.3
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.4e-19 102.4 482 28.0
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.0e-19 101.3 403 28.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 6.8e-19 100.1 506 26.7
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.6e-18 98.2 464 26.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 3.4e-18 97.8 366 28.4
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 7.5e-18 96.7 324 29.6
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 9.7e-18 96.3 563 25.4
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.8e-17 94.7 466 26.6
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.8e-17 94.7 121 47.9
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 4.8e-17 94.0 365 28.8
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 8.3e-17 93.2 326 29.4
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 8.3e-17 93.2 324 30.9
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 8.3e-17 93.2 521 26.3
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.4e-16 91.7 525 25.7
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 4.1e-16 90.9 529 26.7
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 4.1e-16 90.9 357 28.9
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 5.3e-16 90.5 398 27.6
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 3.5e-15 87.8 330 29.1
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.5e-15 87.4 496 27.0
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 5.9e-15 87.0 465 26.0
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.7e-15 86.7 170 37.1
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.3e-14 85.9 365 29.3
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 5.5e-13 80.5 326 27.6
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 1.2e-12 79.3 412 25.5
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 8.0e-12 76.6 183 31.1
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 4.0e-11 74.3 65 58.5
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 8.3e-09 66.6 93 45.2
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 1.1e-08 66.2 383 25.3
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 5.4e-08 63.9 178 32.0
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.5e-07 60.8 227 29.5
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.3e-06 59.3 151 31.1


User provided reference genes

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