Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb428600 Zea mays HOM05D006518 ORTHO05D008270 1.3e-51 206.1 103 100.0
Zm00001eb114970 Zea mays HOM05D006518 ORTHO05D008270 4.3e-50 201.1 102 98.0
Zm00001eb044370 Zea mays HOM05D006518 ORTHO05D008270 6.4e-46 187.2 95 97.9
Os11g0602900 Oryza sativa ssp. japonica HOM05D006518 ORTHO05D008270 5.0e-43 177.6 102 83.3
Ca_04765_v3 Cicer arietinum L. HOM05D006518 ORTHO05D008270 1.1e-42 176.4 102 81.4
Medtr5g039210 Medicago truncatula HOM05D006518 ORTHO05D008270 2.5e-42 175.3 101 82.2
Duzib251G0137 Durio zibethinus HOM05D006518 ORTHO05D008270 9.5e-42 173.3 100 83.0
arahy.Tifrunner.gnm1.ann1.251ATU Arachis hypogaea HOM05D006518 ORTHO05D008270 1.2e-41 172.9 102 81.4
arahy.Tifrunner.gnm1.ann1.YAGN0V Arachis hypogaea HOM05D006518 ORTHO05D008270 1.2e-41 172.9 102 81.4
Gohir.A03G099700 Gossypium hirsutum HOM05D006518 ORTHO05D008270 1.2e-41 172.9 101 81.2
Gohir.D02G124600 Gossypium hirsutum HOM05D006518 ORTHO05D008270 1.2e-41 172.9 101 82.2
CDE09G0040 Ceratophyllum demersum HOM05D006518 ORTHO05D008270 2.1e-41 172.2 101 80.2
Manes.05G099400 Manihot esculenta HOM05D006518 ORTHO05D008270 2.8e-41 171.8 102 79.4
Nn4g23099 Nelumbo nucifera HOM05D006518 ORTHO05D008270 2.8e-41 171.8 102 80.4
TAR374G0832 Trochodendron aralioides HOM05D006518 ORTHO05D008270 2.8e-41 171.8 102 79.4
DCAR_031032 Daucus carota HOM05D006518 ORTHO05D008270 6.2e-41 170.6 101 81.2
Gorai.005G140100 Gossypium raimondii HOM05D006518 ORTHO05D008270 8.0e-41 170.2 101 80.2
TPR.G11706 Trifolium pratense HOM05D006518 ORTHO05D008270 8.0e-41 170.2 101 79.2
Lj2g0006932 Lotus japonicus HOM05D006518 ORTHO05D008270 1.1e-40 169.9 101 80.2
Psat2g127200 Pisum sativum HOM05D006518 ORTHO05D008270 1.1e-40 169.9 101 80.2
COL.COLO4_22979 Corchorus olitorius HOM05D006518 ORTHO05D008270 3.1e-40 168.3 100 80.0
Phvul.002G088300 Phaseolus vulgaris HOM05D006518 ORTHO05D008270 3.1e-40 168.3 101 78.2
Psat2g127240 Pisum sativum HOM05D006518 ORTHO05D008270 3.1e-40 168.3 101 78.2
THA.LOC104822922 Tarenaya hassleriana HOM05D006518 ORTHO05D008270 3.1e-40 168.3 101 81.2
VMungo1215G0700 Vigna mungo HOM05D006518 ORTHO05D008270 3.1e-40 168.3 101 77.2
Eucgr.G02518 Eucalyptus grandis HOM05D006518 ORTHO05D008270 4.0e-40 167.9 101 79.2
MBI02_g34551_MAGBIO Magnolia biondii HOM05D006518 ORTHO05D008270 4.0e-40 167.9 102 76.5
Sabra10G0008100 Salix brachista HOM05D006518 ORTHO05D008270 4.0e-40 167.9 102 76.5
CSS0005609 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 5.2e-40 167.5 102 77.5
MD13G1074200 Malus domestica HOM05D006518 ORTHO05D008270 5.2e-40 167.5 101 78.2
GSVIVG01020024001 Vitis vinifera HOM05D006518 ORTHO05D008270 5.2e-40 167.5 102 77.5
CAN.G38.25 Capsicum annuum HOM05D006518 ORTHO05D008270 6.8e-40 167.2 102 78.4
HanXRQChr17g0545181 Helianthus annuus HOM05D006518 ORTHO05D008270 6.8e-40 167.2 100 81.0
MD16G1075600 Malus domestica HOM05D006518 ORTHO05D008270 6.8e-40 167.2 101 78.2
Atru.chr11.1828 Acer truncatum HOM05D006518 ORTHO05D008270 8.9e-40 166.8 101 78.2
Aqoxy3G03336 Aquilegia oxysepala HOM05D006518 ORTHO05D008270 8.9e-40 166.8 102 77.5
Glyma.02G105500 Glycine max HOM05D006518 ORTHO05D008270 8.9e-40 166.8 101 76.2
SalBow2G0178 Salvia bowleyana HOM05D006518 ORTHO05D008270 8.9e-40 166.8 100 81.0
SalBow2G1811 Salvia bowleyana HOM05D006518 ORTHO05D008270 8.9e-40 166.8 100 81.0
vmacro01240 Vaccinium macrocarpon HOM05D006518 ORTHO05D008270 8.9e-40 166.8 102 77.5
BcaC05g26368 Brassica carinata HOM05D006518 ORTHO05D008270 1.2e-39 166.4 101 80.2
A09p40360 Brassica napus HOM05D006518 ORTHO05D008270 1.2e-39 166.4 101 80.2
BolC5t31137H Brassica oleracea HOM05D006518 ORTHO05D008270 1.2e-39 166.4 101 80.2
BraA09t39533Z Brassica rapa HOM05D006518 ORTHO05D008270 1.2e-39 166.4 101 80.2
CSS0004247 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 1.2e-39 166.4 102 76.5
CANSAT64G2267 Cannabis sativa HOM05D006518 ORTHO05D008270 1.2e-39 166.4 101 78.2
CiPaw.06G082900 Carya illinoinensis HOM05D006518 ORTHO05D008270 1.2e-39 166.4 102 75.5
PGR119G2153 Punica granatum HOM05D006518 ORTHO05D008270 1.2e-39 166.4 102 78.4
Dinv16627 Davidia involucrata HOM05D006518 ORTHO05D008270 1.5e-39 166.0 102 75.5
Lalb_Chr17g0340541 Lupinus albus HOM05D006518 ORTHO05D008270 1.5e-39 166.0 102 78.4
Pp3c22_14990 Physcomitrium patens HOM05D006518 ORTHO05D008270 1.5e-39 166.0 102 76.5
C08p22660 Brassica napus HOM05D006518 ORTHO05D008270 2.0e-39 165.6 101 79.2
BolC8t49904H Brassica oleracea HOM05D006518 ORTHO05D008270 2.0e-39 165.6 101 79.2
CsaV3_2G010590 Cucumis sativus L. HOM05D006518 ORTHO05D008270 2.6e-39 165.2 102 77.5
Lj6A791G23 Lonicera japonica HOM05D006518 ORTHO05D008270 2.6e-39 165.2 102 77.5
TWI18G0776 Tripterygium wilfordii HOM05D006518 ORTHO05D008270 2.6e-39 165.2 101 79.2
Actinidia19864 Actinidia chinensis HOM05D006518 ORTHO05D008270 3.4e-39 164.9 102 75.5
AL1G38610 Arabidopsis lyrata HOM05D006518 ORTHO05D008270 3.4e-39 164.9 101 79.2
AT1G26940 Arabidopsis thaliana HOM05D006518 ORTHO05D008270 3.4e-39 164.9 101 79.2
Carub.0001s2404 Capsella rubella HOM05D006518 ORTHO05D008270 3.4e-39 164.9 101 79.2
ClCG11G007330 Citrullus lanatus HOM05D006518 ORTHO05D008270 3.4e-39 164.9 102 77.5
Thecc.02G349100 Theobroma cacao HOM05D006518 ORTHO05D008270 4.4e-39 164.5 100 79.0
ATR0684G233 Amborella trichopoda HOM05D006518 ORTHO05D008270 5.8e-39 164.1 102 76.5
Potri.010G012900 Populus trichocarpa HOM05D006518 ORTHO05D008270 5.8e-39 164.1 102 77.5
RcHm_v2.0_Chr4g0440101 Rosa chinensis HOM05D006518 ORTHO05D008270 5.8e-39 164.1 102 75.5
Hma1.2p1_0598F.1_g186750 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 7.5e-39 163.7 101 75.2
MSTRG.7814 Avicennia marina HOM05D006518 ORTHO05D008270 9.8e-39 163.3 102 76.5
A08p27650 Brassica napus HOM05D006518 ORTHO05D008270 9.8e-39 163.3 101 78.2
BraA08t34702Z Brassica rapa HOM05D006518 ORTHO05D008270 9.8e-39 163.3 101 78.2
Thhalv10008695m.g Eutrema salsugineum HOM05D006518 ORTHO05D008270 9.8e-39 163.3 101 78.2
Sp1g21840 Schrenkiella parvula HOM05D006518 ORTHO05D008270 9.8e-39 163.3 101 78.2
EL10Ac6g13177 Beta vulgaris HOM05D006518 ORTHO05D008270 1.3e-38 162.9 102 74.5
CARHR024970 Cardamine hirsuta HOM05D006518 ORTHO05D008270 1.3e-38 162.9 101 78.2
FAN17G1605 Fragaria x ananassa HOM05D006518 ORTHO05D008270 1.3e-38 162.9 102 76.5
Sed0000225 Sechium edule HOM05D006518 ORTHO05D008270 1.3e-38 162.9 102 75.5
Sc04g0004950 Simmondsia chinensis HOM05D006518 ORTHO05D008270 1.3e-38 162.9 102 73.5
unitig_22.g6524 Utricularia gibba HOM05D006518 ORTHO05D008270 1.3e-38 162.9 102 75.5
FvH4_4g31590 Fragaria vesca HOM05D006518 ORTHO05D008270 1.7e-38 162.5 102 75.5
Aa31LG7G8200 Aethionema arabicum HOM05D006518 ORTHO05D008270 2.2e-38 162.2 101 76.2
Lsat_1_v5_gn_3_52920 Lactuca sativa HOM05D006518 ORTHO05D008270 2.2e-38 162.2 101 77.2
PSO063G1773 Papaver somniferum HOM05D006518 ORTHO05D008270 2.2e-38 162.2 100 76.0
FAN12G4204 Fragaria x ananassa HOM05D006518 ORTHO05D008270 2.9e-38 161.8 102 75.5
PGSC0003DMG400000875 Solanum tuberosum HOM05D006518 ORTHO05D008270 2.9e-38 161.8 100 77.0
HPP92_016855 Vanilla planifolia HOM05D006518 ORTHO05D008270 2.9e-38 161.8 102 74.5
FAN22G1577 Fragaria x ananassa HOM05D006518 ORTHO05D008270 3.7e-38 161.4 102 74.5
Nitab4.5_0000141g0290 Nicotiana tabacum HOM05D006518 ORTHO05D008270 3.7e-38 161.4 102 75.5
ECA246G2657 Erigeron canadensis HOM05D006518 ORTHO05D008270 4.9e-38 161.0 100 78.0
FAN07G2562 Fragaria x ananassa HOM05D006518 ORTHO05D008270 4.9e-38 161.0 102 74.5
QL03p064826 Quercus lobata HOM05D006518 ORTHO05D008270 4.9e-38 161.0 102 72.5
Ciclev10032751m.g Citrus clementina HOM05D006518 ORTHO05D008270 6.4e-38 160.6 102 75.5
Cc11_g13260 Coffea canephora HOM05D006518 ORTHO05D008270 6.4e-38 160.6 102 73.5
Solyc01g010590.2 Solanum lycopersicum HOM05D006518 ORTHO05D008270 6.4e-38 160.6 100 77.0
MELO3C008553.2 Cucumis melo HOM05D006518 ORTHO05D008270 1.1e-37 159.8 110 72.7
Sopen01g006240 Solanum pennellii HOM05D006518 ORTHO05D008270 1.1e-37 159.8 100 77.0
Oeu028298.1 Olea europaea HOM05D006518 ORTHO05D008270 1.4e-37 159.5 100 76.0
Mapoly0071s0062 Marchantia polymorpha HOM05D006518 ORTHO05D008270 2.4e-37 158.7 102 73.5
AagrBONN_evm.TU.Sc2ySwM_344.4129 Anthoceros agrestis HOM05D006518 ORTHO05D008270 1.6e-36 156.0 100 74.0
Migut.L01314 Erythranthe guttata HOM05D006518 ORTHO05D008270 4.6e-36 154.5 91 81.3
Haze_12032 Corylus avellana HOM05D006518 ORTHO05D008270 1.3e-35 152.9 92 77.2
Haze_12039 Corylus avellana HOM05D006518 ORTHO05D008270 1.3e-35 152.9 92 77.2
AUR62028810 Chenopodium quinoa HOM05D006518 ORTHO05D008270 1.1e-34 149.8 95 72.6
Hund25256 Selenicereus undatus HOM05D006518 ORTHO05D008270 2.1e-33 145.6 88 76.1
AUR62005750 Chenopodium quinoa HOM05D006518 ORTHO05D008270 3.6e-33 144.8 92 72.8
Hma1.2p1_0598F.1_g186760 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 8.9e-32 140.2 86 74.4
Peaxi162Scf00026g00297 Petunia axillaris HOM05D006518 ORTHO05D008270 2.6e-31 138.7 109 64.2
SMO358G0251 Selaginella moellendorffii HOM05D006518 ORTHO05D008270 4.4e-31 137.9 112 63.4
Nitab4.5_0003566g0030 Nicotiana tabacum HOM05D006518 ORTHO05D008270 6.4e-30 134.0 102 66.7
Rhsim12G0061300 Rhododendron simsii HOM05D006518 ORTHO05D008270 8.3e-30 133.7 122 58.2
MCO05G545 Micromonas commoda HOM05D006518 ORTHO05D008270 3.9e-27 124.8 103 58.3
Glyma.01G044900 Glycine max HOM05D006518 ORTHO05D008270 5.1e-27 124.4 77 74.0
Sed0010295 Sechium edule HOM05D006518 ORTHO05D008270 2.5e-26 122.1 73 79.5
PSO832G3732 Papaver somniferum HOM05D006518 ORTHO05D008270 2.4e-24 115.5 67 79.1
SGA_v2.0_scaffold302G47835 Striga asiatica HOM05D006518 ORTHO05D008270 6.8e-24 114.0 110 60.0
Prupe.1G271800 Prunus persica HOM05D006518 ORTHO05D008270 3.5e-20 101.7 61 77.0
Cre06.g292500 Chlamydomonas reinhardtii HOM05D006518 ORTHO05D008270 6.6e-19 97.4 141 41.1
Ah.03g135280 Amaranthus hybridus HOM05D006518 ORTHO05D008270 1.5e-18 96.3 60 73.3
SalBow1G2824 Salvia bowleyana HOM05D006518 ORTHO05D008270 7.8e-12 73.9 73 56.2
Cpa.g.sc183.33 Carica papaya HOM05D006518 ORTHO05D008270 8.1e-09 63.9 38 78.9
Psat3g061480 Pisum sativum HOM05D000144 ORTHO05D000392 3.8e-06 55.1 67 43.3
FAN27G2065 Fragaria x ananassa HOM05D000144 ORTHO05D000392 4.9e-06 54.7 68 39.7
FAN24G1008 Fragaria x ananassa HOM05D000144 ORTHO05D000392 6.4e-06 54.3 85 36.5
Pp3c12_18980 Physcomitrium patens HOM05D000144 ORTHO05D003364 6.4e-06 54.3 83 32.5
ECA247G3715 Erigeron canadensis HOM05D000144 ORTHO05D000392 8.4e-06 53.9 53 49.1
HanXRQChr10g0281901 Helianthus annuus HOM05D000144 ORTHO05D000392 8.4e-06 53.9 54 48.1
Lsat_1_v5_gn_9_7900 Lactuca sativa HOM05D000144 ORTHO05D000392 8.4e-06 53.9 53 50.9
MD03G1257000 Malus domestica HOM05D000144 ORTHO05D000392 8.4e-06 53.9 74 37.8
Mapoly0005s0265 Marchantia polymorpha HOM05D000144 ORTHO05D008375 8.4e-06 53.9 70 45.7
TPR.G19101 Trifolium pratense HOM05D000144 ORTHO05D000392 8.4e-06 53.9 53 49.1


User provided reference genes

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