Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb424350 Zea mays HOM05D003797 ORTHO05D004370 1.3e-85 319.7 168 100.0
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 5.6e-76 287.7 167 86.8
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 1.8e-66 256.1 164 76.8
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 5.9e-65 251.1 165 75.8
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 5.9e-65 251.1 165 78.8
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 1.1e-63 246.9 164 73.8
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 1.1e-63 246.9 164 73.8
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 1.1e-63 246.9 164 73.2
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 2.5e-63 245.7 164 72.0
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 3.2e-63 245.4 164 72.0
MELO3C005259.2 Cucumis melo HOM05D003797 ORTHO05D004370 3.2e-63 245.4 166 71.1
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 3.2e-63 245.4 165 72.7
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 3.2e-63 245.4 164 73.2
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 7.2e-63 244.2 164 71.3
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 7.2e-63 244.2 164 72.6
Peaxi162Scf00337g00715 Petunia axillaris HOM05D003797 ORTHO05D004370 7.2e-63 244.2 164 72.0
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 9.3e-63 243.8 165 71.5
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 1.2e-62 243.4 164 71.3
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 1.6e-62 243.0 163 71.8
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 2.1e-62 242.7 164 72.6
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 2.1e-62 242.7 164 72.0
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 2.7e-62 242.3 167 73.1
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 2.7e-62 242.3 165 75.2
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 3.5e-62 241.9 163 72.4
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 3.5e-62 241.9 164 72.6
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 4.6e-62 241.5 164 70.7
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 4.6e-62 241.5 164 71.3
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 6.1e-62 241.1 167 71.3
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 1.0e-61 240.4 164 72.6
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 1.0e-61 240.4 164 72.6
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 1.0e-61 240.4 164 70.7
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 1.8e-61 239.6 164 71.3
HanXRQChr12g0383081 Helianthus annuus HOM05D003797 ORTHO05D004370 1.8e-61 239.6 164 72.0
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 1.8e-61 239.6 167 71.9
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 1.8e-61 239.6 167 70.7
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 1.8e-61 239.6 165 72.1
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 2.3e-61 239.2 164 70.7
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 2.3e-61 239.2 163 71.2
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 2.3e-61 239.2 165 72.1
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 2.3e-61 239.2 164 70.7
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 2.3e-61 239.2 164 70.7
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 3.0e-61 238.8 166 69.3
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 5.1e-61 238.0 164 70.7
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 6.7e-61 237.7 162 70.4
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 6.7e-61 237.7 163 69.9
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 6.7e-61 237.7 164 70.1
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 6.7e-61 237.7 164 70.1
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 6.7e-61 237.7 163 71.8
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 6.7e-61 237.7 164 69.5
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 8.7e-61 237.3 162 70.4
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.1e-60 236.9 164 70.7
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 1.5e-60 236.5 164 68.9
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 1.5e-60 236.5 164 70.1
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 1.5e-60 236.5 165 71.5
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 1.5e-60 236.5 163 70.6
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 1.5e-60 236.5 164 70.1
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 1.9e-60 236.1 163 68.7
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 1.9e-60 236.1 163 69.9
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 2.5e-60 235.7 163 69.9
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 2.5e-60 235.7 163 70.6
CDE05G1112 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 3.3e-60 235.3 165 70.3
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 3.3e-60 235.3 164 69.5
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 3.3e-60 235.3 163 69.3
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 3.3e-60 235.3 164 69.5
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 4.3e-60 235.0 164 70.1
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 4.3e-60 235.0 162 69.8
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 4.3e-60 235.0 162 69.8
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 4.3e-60 235.0 165 70.3
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 4.3e-60 235.0 164 70.7
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 4.3e-60 235.0 164 69.5
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 4.3e-60 235.0 165 69.7
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 5.7e-60 234.6 164 69.5
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 5.7e-60 234.6 164 70.7
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 9.7e-60 233.8 164 68.9
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 9.7e-60 233.8 163 69.9
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 9.7e-60 233.8 163 69.9
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 1.3e-59 233.4 163 69.9
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 1.3e-59 233.4 163 69.3
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 1.6e-59 233.0 164 70.7
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 1.6e-59 233.0 165 67.9
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.6e-59 233.0 161 71.4
HanXRQChr09g0251961 Helianthus annuus HOM05D003797 ORTHO05D004370 1.6e-59 233.0 164 72.0
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 1.6e-59 233.0 162 70.4
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 2.2e-59 232.6 164 68.9
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 2.8e-59 232.3 164 68.3
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 2.8e-59 232.3 164 68.3
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 2.8e-59 232.3 164 68.3
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 2.8e-59 232.3 164 68.3
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 2.8e-59 232.3 164 68.3
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 2.8e-59 232.3 165 69.7
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 2.8e-59 232.3 163 69.3
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.8e-59 232.3 163 69.3
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 2.8e-59 232.3 162 69.1
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 3.7e-59 231.9 165 67.9
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.7e-59 231.9 163 69.3
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 6.3e-59 231.1 164 68.3
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 6.3e-59 231.1 165 68.5
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 8.2e-59 230.7 181 64.1
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 1.1e-58 230.3 164 67.7
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 1.1e-58 230.3 162 69.8
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 1.1e-58 230.3 162 69.8
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 1.1e-58 230.3 163 68.7
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.4e-58 229.9 164 68.3
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 1.4e-58 229.9 162 67.9
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 1.4e-58 229.9 165 69.7
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 1.4e-58 229.9 164 68.3
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 1.4e-58 229.9 164 68.3
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 1.8e-58 229.6 163 69.3
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.8e-58 229.6 165 69.7
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.8e-58 229.6 163 68.1
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.8e-58 229.6 165 69.7
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 1.8e-58 229.6 162 67.3
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 2.4e-58 229.2 162 69.8
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 2.4e-58 229.2 163 69.3
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 2.4e-58 229.2 163 69.3
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 3.1e-58 228.8 162 69.1
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 3.1e-58 228.8 165 67.3
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 3.1e-58 228.8 162 69.8
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 3.1e-58 228.8 162 67.9
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 4.1e-58 228.4 164 66.5
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 5.3e-58 228.0 165 69.1
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 5.3e-58 228.0 165 69.7
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 6.9e-58 227.6 164 68.9
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 6.9e-58 227.6 164 68.9
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 6.9e-58 227.6 163 69.3
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.2e-57 226.9 165 69.7
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 1.2e-57 226.9 164 70.1
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 1.2e-57 226.9 164 67.1
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 1.5e-57 226.5 164 66.5
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.5e-57 226.5 165 69.1
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 2.0e-57 226.1 161 70.2
A06p44090 Brassica napus HOM05D003797 ORTHO05D004370 2.0e-57 226.1 164 66.5
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 2.0e-57 226.1 164 67.7
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 2.0e-57 226.1 162 67.9
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 2.6e-57 225.7 164 66.5
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 4.5e-57 224.9 163 67.5
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 2.2e-56 222.6 163 67.5
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.2e-56 222.6 177 63.8
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 2.2e-56 222.6 164 66.5
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 2.9e-56 222.2 165 65.5
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 3.8e-56 221.9 161 66.5
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 5.0e-56 221.5 162 66.0
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 6.5e-56 221.1 164 65.2
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 4.2e-55 218.4 167 65.3
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 4.2e-55 218.4 165 66.1
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 4.2e-55 218.4 164 65.2
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 7.2e-55 217.6 163 65.0
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 1.2e-54 216.9 166 62.7
BcaB05g24664 Brassica carinata HOM05D003797 ORTHO05D004370 1.4e-53 213.4 165 64.2
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 3.0e-53 212.2 164 65.2
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 6.7e-53 211.1 165 64.2
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 5.7e-52 208.0 191 57.6
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 3.7e-51 205.3 163 64.4
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 1.4e-50 203.4 134 74.6
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 5.0e-48 194.9 143 67.1
Haze_10851 Corylus avellana HOM05D003797 ORTHO05D004370 1.1e-47 193.7 135 68.1
Eucgr.L02831 Eucalyptus grandis HOM05D003797 ORTHO05D004370 5.5e-47 191.4 133 70.7
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 6.1e-46 188.0 162 61.7
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 1.4e-45 186.8 164 56.7
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 2.3e-45 186.0 164 58.5
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 2.0e-44 183.0 164 55.5
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 2.6e-44 182.6 171 53.8
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 5.7e-44 181.4 164 56.1
Sed0010431 Sechium edule HOM05D003797 ORTHO05D004370 1.6e-41 173.3 164 57.3
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 6.1e-38 161.4 158 53.8
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 8.8e-37 157.5 137 54.7
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 1.1e-36 157.1 111 65.8
Zm00001eb099160 Zea mays HOM05D003797 ORTHO05D004370 4.5e-33 145.2 101 77.2
SEGI_29045 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 5.0e-32 141.7 103 66.0
VMungo0251G2644 Vigna mungo HOM05D003797 ORTHO05D004370 5.2e-29 131.7 99 69.7
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 1.9e-23 113.2 72 75.0
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 3.6e-22 109.0 67 73.1
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 3.0e-21 105.9 66 71.2
Nn4g24451 Nelumbo nucifera HOM05D003797 ORTHO05D004370 7.7e-17 91.3 70 61.4
unitig_52.g17091 Utricularia gibba HOM05D003797 ORTHO05D004370 8.3e-11 71.2 70 51.4
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 1.4e-10 70.5 172 33.1
Thecc.06G045600 Theobroma cacao HOM05D003797 ORTHO05D004370 1.2e-06 57.4 53 43.4


User provided reference genes

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