Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb423090 Zea mays HOM05D002635 ORTHO05D002756 4.2e-83 311.2 149 100.0
Os04g0443700 Oryza sativa ssp. japonica HOM05D002635 ORTHO05D002756 2.6e-32 142.5 97 72.2
MBI03_g28424_MAGBIO Magnolia biondii HOM05D002635 ORTHO05D002756 2.9e-23 112.5 95 54.7
COL.COLO4_17694 Corchorus olitorius HOM05D002635 ORTHO05D002756 4.2e-22 108.6 89 55.1
HPP92_004661 Vanilla planifolia HOM05D002635 ORTHO05D002756 7.1e-22 107.8 89 53.9
Ciclev10001394m.g Citrus clementina HOM05D002635 ORTHO05D002756 1.0e-20 104.0 95 55.8
Duzib132G0923 Durio zibethinus HOM05D002635 ORTHO05D002756 3.9e-20 102.1 91 53.8
TAR381G0357 Trochodendron aralioides HOM05D002635 ORTHO05D002756 3.9e-20 102.1 100 53.0
Thecc.02G014300 Theobroma cacao HOM05D002635 ORTHO05D002756 5.1e-20 101.7 91 52.7
TWI59G0859 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 5.1e-20 101.7 100 53.0
Zm00001eb366030 Zea mays HOM05D002635 ORTHO05D002756 8.7e-20 100.9 103 50.5
CsaV3_3G006550 Cucumis sativus L. HOM05D002635 ORTHO05D002756 1.1e-19 100.5 82 57.3
Dinv19431 Davidia involucrata HOM05D002635 ORTHO05D002756 1.1e-19 100.5 95 52.6
Gorai.012G170100 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.5e-19 100.1 91 50.5
Duzib052G0871 Durio zibethinus HOM05D002635 ORTHO05D002756 1.9e-19 99.8 91 51.6
Prupe.1G582400 Prunus persica HOM05D002635 ORTHO05D002756 2.5e-19 99.4 101 52.5
Gohir.D04G177200 Gossypium hirsutum HOM05D002635 ORTHO05D002756 3.3e-19 99.0 80 53.8
TWI23G0700 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 3.3e-19 99.0 101 54.5
AL1G67330 Arabidopsis lyrata HOM05D002635 ORTHO05D002756 4.3e-19 98.6 89 52.8
AT1G57680 Arabidopsis thaliana HOM05D002635 ORTHO05D002756 4.3e-19 98.6 89 52.8
Carub.0002s0693 Capsella rubella HOM05D002635 ORTHO05D002756 4.3e-19 98.6 89 52.8
A01p28120 Brassica napus HOM05D002635 ORTHO05D002756 7.3e-19 97.8 91 50.5
BraA01t02939Z Brassica rapa HOM05D002635 ORTHO05D002756 7.3e-19 97.8 91 50.5
Thhalv10023548m.g Eutrema salsugineum HOM05D002635 ORTHO05D002756 7.3e-19 97.8 89 51.7
Sabra03G0001800 Salix brachista HOM05D002635 ORTHO05D002756 7.3e-19 97.8 94 52.1
TAR624G0320 Trochodendron aralioides HOM05D002635 ORTHO05D002756 7.3e-19 97.8 94 51.1
Actinidia00167 Actinidia chinensis HOM05D002635 ORTHO05D002756 9.6e-19 97.4 98 52.0
MD08G1245000 Malus domestica HOM05D002635 ORTHO05D002756 9.6e-19 97.4 101 51.5
THA.LOC104823706 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 9.6e-19 97.4 90 48.9
HPP92_004537 Vanilla planifolia HOM05D002635 ORTHO05D002756 9.6e-19 97.4 89 49.4
Dinv29614 Davidia involucrata HOM05D002635 ORTHO05D002756 1.6e-18 96.7 95 50.5
Gohir.D01G131300 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.6e-18 96.7 80 53.8
Gorai.002G163000 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.6e-18 96.7 80 53.8
Manes.10G115400 Manihot esculenta HOM05D002635 ORTHO05D002756 1.6e-18 96.7 94 54.3
PGR142G4069 Punica granatum HOM05D002635 ORTHO05D002756 1.6e-18 96.7 101 51.5
Sp2g05650 Schrenkiella parvula HOM05D002635 ORTHO05D002756 1.6e-18 96.7 89 51.7
Atru.chr6.455 Acer truncatum HOM05D002635 ORTHO05D002756 2.1e-18 96.3 94 53.2
FvH4_5g28140 Fragaria vesca HOM05D002635 ORTHO05D002756 2.1e-18 96.3 90 53.3
FAN18G1247 Fragaria x ananassa HOM05D002635 ORTHO05D002756 2.1e-18 96.3 90 53.3
Potri.003G003500 Populus trichocarpa HOM05D002635 ORTHO05D002756 2.1e-18 96.3 94 52.1
RcHm_v2.0_Chr7g0220291 Rosa chinensis HOM05D002635 ORTHO05D002756 2.1e-18 96.3 82 57.3
MELO3C016485.2 Cucumis melo HOM05D002635 ORTHO05D002756 2.8e-18 95.9 82 53.7
Gohir.A03G216000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.8e-18 95.9 80 51.2
Gohir.D02G237600 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.8e-18 95.9 80 51.2
Gorai.005G266100 Gossypium raimondii HOM05D002635 ORTHO05D002756 2.8e-18 95.9 80 51.2
Nn5g27275 Nelumbo nucifera HOM05D002635 ORTHO05D002756 2.8e-18 95.9 94 48.9
Sabra01G0172400 Salix brachista HOM05D002635 ORTHO05D002756 2.8e-18 95.9 94 50.0
Gohir.A04G134000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 3.6e-18 95.5 80 52.5
Potri.004G227000 Populus trichocarpa HOM05D002635 ORTHO05D002756 3.6e-18 95.5 94 51.1
BcaB04g20182 Brassica carinata HOM05D002635 ORTHO05D002756 4.8e-18 95.1 89 50.6
CARHR054490 Cardamine hirsuta HOM05D002635 ORTHO05D002756 4.8e-18 95.1 89 50.6
PSO017G5438 Papaver somniferum HOM05D002635 ORTHO05D002756 4.8e-18 95.1 100 46.0
PSO170G5519 Papaver somniferum HOM05D002635 ORTHO05D002756 4.8e-18 95.1 100 46.0
QL02p101856 Quercus lobata HOM05D002635 ORTHO05D002756 4.8e-18 95.1 92 56.5
Aqoxy5G00844 Aquilegia oxysepala HOM05D002635 ORTHO05D002756 6.2e-18 94.7 86 51.2
CAN.G855.35 Capsicum annuum HOM05D002635 ORTHO05D002756 6.2e-18 94.7 99 49.5
Manes.07G026600 Manihot esculenta HOM05D002635 ORTHO05D002756 6.2e-18 94.7 94 50.0
Lsat_1_v5_gn_9_121240 Lactuca sativa HOM05D002635 ORTHO05D002756 8.1e-18 94.4 97 49.5
Sed0008691 Sechium edule HOM05D002635 ORTHO05D002756 8.1e-18 94.4 82 54.9
THA.LOC104816831 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 8.1e-18 94.4 89 50.6
FAN08G2963 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.1e-17 94.0 89 52.8
Lj9P296T23 Lonicera japonica HOM05D002635 ORTHO05D002756 1.1e-17 94.0 78 52.6
THA.LOC104820362 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 1.1e-17 94.0 90 50.0
BcaB07g31158 Brassica carinata HOM05D002635 ORTHO05D002756 1.4e-17 93.6 79 54.4
BcaC09g49521 Brassica carinata HOM05D002635 ORTHO05D002756 1.4e-17 93.6 93 49.5
C01p35650 Brassica napus HOM05D002635 ORTHO05D002756 1.4e-17 93.6 93 49.5
BolC1t03524H Brassica oleracea HOM05D002635 ORTHO05D002756 1.4e-17 93.6 93 49.5
FAN04G1944 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.4e-17 93.6 90 51.1
HanXRQChr10g0299381 Helianthus annuus HOM05D002635 ORTHO05D002756 1.4e-17 93.6 84 53.6
Hma1.2p1_1368F.1_g278530 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 1.4e-17 93.6 98 51.0
Solyc01g103200.4 Solanum lycopersicum HOM05D002635 ORTHO05D002756 1.4e-17 93.6 85 52.9
Sopen01g045610 Solanum pennellii HOM05D002635 ORTHO05D002756 1.4e-17 93.6 85 52.9
Sopen01g045630 Solanum pennellii HOM05D002635 ORTHO05D002756 1.4e-17 93.6 85 52.9
Nitab4.5_0001057g0160 Nicotiana tabacum HOM05D002635 ORTHO05D002756 1.8e-17 93.2 85 52.9
Nitab4.5_0002546g0060 Nicotiana tabacum HOM05D002635 ORTHO05D002756 1.8e-17 93.2 85 52.9
Haze_10023 Corylus avellana HOM05D002635 ORTHO05D002756 2.4e-17 92.8 92 56.5
Os01g0885200 Oryza sativa ssp. japonica HOM05D002635 ORTHO05D002756 2.4e-17 92.8 102 49.0
Aa31LG1G5410 Aethionema arabicum HOM05D002635 ORTHO05D002756 3.1e-17 92.4 89 48.3
PGSC0003DMG400024875 Solanum tuberosum HOM05D002635 ORTHO05D002756 3.1e-17 92.4 85 51.8
PGR142G3898 Punica granatum HOM05D002635 ORTHO05D002756 4.0e-17 92.0 97 46.4
arahy.Tifrunner.gnm1.ann1.3P7FNU Arachis hypogaea HOM05D002635 ORTHO05D002756 5.3e-17 91.7 97 50.5
arahy.Tifrunner.gnm1.ann1.I3LLGY Arachis hypogaea HOM05D002635 ORTHO05D002756 5.3e-17 91.7 97 50.5
BcaC06g31780 Brassica carinata HOM05D002635 ORTHO05D002756 5.3e-17 91.7 89 50.6
DCAR_006659 Daucus carota HOM05D002635 ORTHO05D002756 5.3e-17 91.7 89 48.3
SHI04877 Sapria himalayana HOM05D002635 ORTHO05D002756 5.3e-17 91.7 93 46.2
Sc09g0002020 Simmondsia chinensis HOM05D002635 ORTHO05D002756 5.3e-17 91.7 83 53.0
Cfa004466 Carpinus fangiana HOM05D002635 ORTHO05D002756 6.9e-17 91.3 92 55.4
HanXRQChr03g0068081 Helianthus annuus HOM05D002635 ORTHO05D002756 6.9e-17 91.3 97 49.5
Aa31LG2G11240 Aethionema arabicum HOM05D002635 ORTHO05D002756 9.0e-17 90.9 83 53.0
MSTRG.16479 Avicennia marina HOM05D002635 ORTHO05D002756 9.0e-17 90.9 73 56.2
BcaC02g10709 Brassica carinata HOM05D002635 ORTHO05D002756 9.0e-17 90.9 89 48.3
C04p26980 Brassica napus HOM05D002635 ORTHO05D002756 9.0e-17 90.9 89 48.3
BolC4t24099H Brassica oleracea HOM05D002635 ORTHO05D002756 9.0e-17 90.9 89 48.3
CSS0009773 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 1.2e-16 90.5 97 48.5
CiPaw.05G002800 Carya illinoinensis HOM05D002635 ORTHO05D002756 2.6e-16 89.4 92 54.3
DCAR_031795 Daucus carota HOM05D002635 ORTHO05D002756 2.6e-16 89.4 87 50.6
BcaC04g22106 Brassica carinata HOM05D002635 ORTHO05D002756 4.5e-16 88.6 89 48.3
C09p23290 Brassica napus HOM05D002635 ORTHO05D002756 4.5e-16 88.6 89 48.3
BolC9t55247H Brassica oleracea HOM05D002635 ORTHO05D002756 4.5e-16 88.6 89 48.3
Cc02_g23390 Coffea canephora HOM05D002635 ORTHO05D002756 4.5e-16 88.6 85 47.1
DCAR_021340 Daucus carota HOM05D002635 ORTHO05D002756 5.8e-16 88.2 94 46.8
Sc16g0009750 Simmondsia chinensis HOM05D002635 ORTHO05D002756 5.8e-16 88.2 79 51.9
SGA_v2.0_scaffold131G34378 Striga asiatica HOM05D002635 ORTHO05D000003 5.8e-16 88.2 78 52.6
A09p18660 Brassica napus HOM05D002635 ORTHO05D002756 7.6e-16 87.8 89 48.3
BraA09t37489Z Brassica rapa HOM05D002635 ORTHO05D002756 7.6e-16 87.8 89 48.3
Ah.06g188440 Amaranthus hybridus HOM05D002635 ORTHO05D002756 9.9e-16 87.4 90 48.9
CSS0014121 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 9.9e-16 87.4 87 49.4
CiPaw.06G175900 Carya illinoinensis HOM05D002635 ORTHO05D002756 9.9e-16 87.4 97 54.6
Lj6g0026247 Lotus japonicus HOM05D002635 ORTHO05D002756 9.9e-16 87.4 92 52.2
Rhsim11G0121400 Rhododendron simsii HOM05D002635 ORTHO05D002756 9.9e-16 87.4 100 47.0
Ca_00022_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 2.2e-15 86.3 92 51.1
Peaxi162Scf00011g01619 Petunia axillaris HOM05D002635 ORTHO05D002756 2.2e-15 86.3 83 51.8
AUR62000568 Chenopodium quinoa HOM05D002635 ORTHO05D002756 2.9e-15 85.9 83 49.4
Phvul.003G075300 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 2.9e-15 85.9 81 53.1
Rhsim05G0116700 Rhododendron simsii HOM05D002635 ORTHO05D002756 4.9e-15 85.1 101 46.5
Psat1g223800 Pisum sativum HOM05D002635 ORTHO05D002756 6.4e-15 84.7 92 50.0
Glyma.16G001300 Glycine max HOM05D002635 ORTHO05D002756 8.4e-15 84.3 92 51.1
Medtr2g005260 Medicago truncatula HOM05D002635 ORTHO05D002756 8.4e-15 84.3 92 50.0
VMungo0540G0642 Vigna mungo HOM05D002635 ORTHO05D002756 8.4e-15 84.3 92 50.0
VMungo1215G1734 Vigna mungo HOM05D002635 ORTHO05D002756 8.4e-15 84.3 81 51.9
Phvul.006G220600 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 1.1e-14 84.0 82 52.4
Migut.B00736 Erythranthe guttata HOM05D002635 ORTHO05D002756 1.4e-14 83.6 83 49.4
TPR.G2087 Trifolium pratense HOM05D002635 ORTHO05D002756 1.4e-14 83.6 92 50.0
Hund07200 Selenicereus undatus HOM05D002635 ORTHO05D002756 1.9e-14 83.2 91 44.0
Migut.N00855 Erythranthe guttata HOM05D002635 ORTHO05D002756 2.4e-14 82.8 73 50.7
MSTRG.27874 Avicennia marina HOM05D002635 ORTHO05D002756 3.2e-14 82.4 78 50.0
MSTRG.5197 Avicennia marina HOM05D002635 ORTHO05D002756 5.4e-14 81.6 89 43.8
Glyma.12G165000 Glycine max HOM05D002635 ORTHO05D002756 5.4e-14 81.6 81 51.9
HanXRQChr16g0513621 Helianthus annuus HOM05D002635 ORTHO05D002756 5.4e-14 81.6 84 47.6
Lsat_1_v5_gn_5_104780 Lactuca sativa HOM05D002635 ORTHO05D002756 7.1e-14 81.3 73 49.3
ATR1089G101 Amborella trichopoda HOM05D002635 ORTHO05D002756 9.3e-14 80.9 90 44.4
unitig_749.g14215 Utricularia gibba HOM05D002635 ORTHO05D002756 1.2e-13 80.5 88 47.7
TPR.G34019 Trifolium pratense HOM05D002635 ORTHO05D002756 1.6e-13 80.1 82 47.6
Glyma.07G273400 Glycine max HOM05D002635 ORTHO05D002756 2.1e-13 79.7 92 40.2
Eucgr.G00246 Eucalyptus grandis HOM05D002635 ORTHO05D002756 2.7e-13 79.3 97 44.3
unitig_26.g9163 Utricularia gibba HOM05D002635 ORTHO05D002756 1.0e-12 77.4 78 50.0
Medtr4g081900 Medicago truncatula HOM05D002635 ORTHO05D002756 1.8e-12 76.6 82 46.3
Medtr4g081890 Medicago truncatula HOM05D002635 ORTHO05D002756 3.0e-12 75.9 87 43.7
SEGI_27222 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 3.9e-12 75.5 89 41.6
Oeu010215.1 Olea europaea HOM05D002635 ORTHO05D002756 6.7e-12 74.7 83 47.0
Oeu058643.1 Olea europaea HOM05D002635 ORTHO05D002756 7.4e-11 71.2 54 57.4
unitig_699.g19846 Utricularia gibba HOM05D002635 ORTHO05D002756 2.1e-10 69.7 73 42.5
Mapoly0003s0203 Marchantia polymorpha HOM05D002635 ORTHO05D002756 2.4e-09 66.2 70 44.3
HPP92_004505 Vanilla planifolia HOM05D002635 ORTHO05D002756 3.1e-09 65.9 62 48.4
ATR0737G083 Amborella trichopoda HOM05D002635 ORTHO05D002756 2.0e-08 63.2 88 34.1
SMO266G0089 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 3.4e-08 62.4 73 41.1
Pp3c1_36080 Physcomitrium patens HOM05D002635 ORTHO05D002756 2.9e-07 59.3 73 39.7
Hma1.2p1_0157F.1_g068985 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 1.9e-06 56.6 40 67.5
SMO364G0496 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 2.4e-06 56.2 80 40.0
Pp3c2_5540 Physcomitrium patens HOM05D002635 ORTHO05D002756 4.2e-06 55.5 73 37.0
PRCOL_00003360 Prasinoderma coloniale HOM05D002635 ORTHO05D002756 9.3e-06 54.3 102 37.3


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