Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb420980 Zea mays HOM05D001866 ORTHO05D004730 2.4e-153 545.4 273 100.0
Zm00001eb246770 Zea mays HOM05D001880 ORTHO05D004730 8.3e-53 211.5 119 92.4
Zm00001eb153800 Zea mays HOM05D001866 ORTHO05D001915 3.9e-26 122.9 139 50.4
Os01g0739200 Oryza sativa ssp. japonica HOM05D001866 ORTHO05D001915 8.2e-16 88.6 73 61.6
Zm00001eb293560 Zea mays HOM05D001866 ORTHO05D001915 2.7e-11 73.6 58 58.6
Os05g0524200 Oryza sativa ssp. japonica HOM05D001866 ORTHO05D001915 6.7e-10 68.9 55 58.2
Os02g0610400 Oryza sativa ssp. japonica HOM05D001880 ORTHO05D004730 2.4e-07 60.5 121 41.3
MD15G1200100 Malus domestica HOM05D001866 ORTHO05D001915 3.1e-07 60.1 82 39.0
MELO3C004603.2 Cucumis melo HOM05D001866 ORTHO05D001915 6.9e-07 58.9 53 54.7
Aqoxy7G01370 Aquilegia oxysepala HOM05D001866 ORTHO05D001915 9.0e-07 58.5 42 61.9
Ca_17375_v3 Cicer arietinum L. HOM05D001866 ORTHO05D001915 9.0e-07 58.5 50 54.0
ClCG11G001980 Citrullus lanatus HOM05D001866 ORTHO05D001915 2.0e-06 57.4 53 52.8
Solyc10g039280.2 Solanum lycopersicum HOM05D001866 ORTHO05D001915 2.0e-06 57.4 41 61.0
Cc06_g10720 Coffea canephora HOM05D001866 ORTHO05D001915 2.6e-06 57.0 77 42.9
MBI04_g07002_MAGBIO Magnolia biondii HOM05D001866 ORTHO05D001915 2.6e-06 57.0 42 59.5
Oeu021610.1 Olea europaea HOM05D001866 ORTHO05D001915 2.6e-06 57.0 41 61.0
Prupe.7G217100 Prunus persica HOM05D001866 ORTHO05D001915 2.6e-06 57.0 41 61.0
Sopen12g003560 Solanum pennellii HOM05D001866 ORTHO05D001915 2.6e-06 57.0 53 49.1
Cpa.g.sc78.39 Carica papaya HOM05D001866 ORTHO05D001915 3.4e-06 56.6 41 63.4
CsaV3_2G001720 Cucumis sativus L. HOM05D001866 ORTHO05D001915 3.4e-06 56.6 41 61.0
FAN26G2214 Fragaria x ananassa HOM05D001866 ORTHO05D001915 3.4e-06 56.6 41 61.0
TPR.G23494 Trifolium pratense HOM05D001866 ORTHO05D001915 3.4e-06 56.6 55 50.9
Sed0011864 Sechium edule HOM05D001866 ORTHO05D001915 4.5e-06 56.2 55 49.1
Sopen10g012150 Solanum pennellii HOM05D001866 ORTHO05D001915 4.5e-06 56.2 41 58.5
CANSAT56G0586 Cannabis sativa HOM05D001866 ORTHO05D001915 5.9e-06 55.8 41 61.0
Dinv36712 Davidia involucrata HOM05D001866 ORTHO05D001915 5.9e-06 55.8 41 61.0
Glyma.08G032000 Glycine max HOM05D001866 ORTHO05D001915 5.9e-06 55.8 50 50.0
MD02G1068600 Malus domestica HOM05D001866 ORTHO05D001915 5.9e-06 55.8 81 43.2
Psat7g018360 Pisum sativum HOM05D001866 ORTHO05D001915 5.9e-06 55.8 50 52.0
CDE05G0284 Ceratophyllum demersum HOM05D001866 ORTHO05D001915 7.7e-06 55.5 54 50.0
CDE05G3129 Ceratophyllum demersum HOM05D001866 ORTHO05D001915 7.7e-06 55.5 54 50.0
Dinv42267 Davidia involucrata HOM05D001866 ORTHO05D001915 7.7e-06 55.5 41 58.5
FAN28G2280 Fragaria x ananassa HOM05D001866 ORTHO05D001915 7.7e-06 55.5 41 58.5
Manes.01G084600 Manihot esculenta HOM05D001866 ORTHO05D001915 7.7e-06 55.5 56 46.4
PGSC0003DMG400004324 Solanum tuberosum HOM05D001866 ORTHO05D001915 7.7e-06 55.5 43 58.1
FvH4_1g06520 Fragaria vesca HOM05D001866 ORTHO05D001915 1.0e-05 55.1 41 58.5
FAN19G2298 Fragaria x ananassa HOM05D001866 ORTHO05D001915 1.0e-05 55.1 41 58.5
SGA_v2.0_scaffold153G36915 Striga asiatica HOM05D001866 ORTHO05D008812 1.0e-05 55.1 41 58.5
GSVIVG01015275001 Vitis vinifera HOM05D001866 ORTHO05D001915 1.0e-05 55.1 82 37.8


User provided reference genes

Program Settings