Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 2.3e-44 181.8 90 100.0
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 7.5e-43 176.8 88 98.9
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 1.3e-39 166.0 90 87.8
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 4.3e-38 161.0 88 86.4
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 9.5e-38 159.8 88 86.4
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 9.5e-38 159.8 88 86.4
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 2.8e-37 158.3 88 84.1
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 2.8e-37 158.3 89 83.1
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 3.6e-37 157.9 88 85.2
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 3.6e-37 157.9 88 86.4
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.7e-37 157.5 88 85.2
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 4.7e-37 157.5 88 85.2
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 4.7e-37 157.5 88 85.2
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 4.7e-37 157.5 88 85.2
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 4.7e-37 157.5 88 85.2
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 6.2e-37 157.1 88 84.1
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 8.0e-37 156.8 88 84.1
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 8.0e-37 156.8 88 85.2
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.1e-36 156.4 88 84.1
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 1.1e-36 156.4 88 84.1
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 1.1e-36 156.4 121 70.2
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.4e-36 156.0 88 83.0
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 81.8
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 85.2
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 81.8
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 83.0
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 84.1
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 2.3e-36 155.2 88 81.8
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 3.1e-36 154.8 88 83.0
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 3.1e-36 154.8 88 80.7
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 4.0e-36 154.5 88 83.0
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 5.2e-36 154.1 88 84.1
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 6.8e-36 153.7 88 81.8
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 6.8e-36 153.7 88 81.8
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 6.8e-36 153.7 88 81.8
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 6.8e-36 153.7 88 85.2
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 6.8e-36 153.7 87 82.8
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 8.9e-36 153.3 86 83.7
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 8.9e-36 153.3 88 81.8
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 83.0
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 81.8
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 81.8
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 81.8
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 81.8
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 1.5e-35 152.5 88 81.8
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 2.0e-35 152.1 88 81.8
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 2.6e-35 151.8 88 81.8
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 2.6e-35 151.8 88 83.0
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 3.4e-35 151.4 88 79.5
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 3.4e-35 151.4 88 80.7
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 4.4e-35 151.0 88 79.5
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 4.4e-35 151.0 88 79.5
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 5.8e-35 150.6 88 81.8
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 5.8e-35 150.6 88 79.5
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 5.8e-35 150.6 88 80.7
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 7.5e-35 150.2 88 80.7
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 9.8e-35 149.8 82 84.1
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 88 80.7
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 1.3e-34 149.4 88 83.0
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 1.7e-34 149.1 88 80.7
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 1.7e-34 149.1 88 81.8
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.2e-34 148.7 88 79.5
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.2e-34 148.7 88 79.5
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 2.9e-34 148.3 88 78.4
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 2.9e-34 148.3 88 78.4
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.9e-34 147.5 88 80.7
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 4.9e-34 147.5 88 79.5
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.4e-34 147.1 88 77.3
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.1e-33 146.4 88 80.7
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 1.4e-33 146.0 88 78.4
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 2.4e-33 145.2 88 78.4
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 2.4e-33 145.2 88 78.4
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 2.4e-33 145.2 88 78.4
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 2.4e-33 145.2 88 78.4
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 2.4e-33 145.2 87 80.5
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 5.4e-33 144.1 88 78.4
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 5.4e-33 144.1 88 78.4
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 5.4e-33 144.1 88 77.3
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 5.4e-33 144.1 88 78.4
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 5.4e-33 144.1 88 76.1
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 5.4e-33 144.1 89 79.8
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 9.2e-33 143.3 88 77.3
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 9.2e-33 143.3 88 77.3
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 9.2e-33 143.3 88 77.3
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 9.2e-33 143.3 88 77.3
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 9.2e-33 143.3 88 77.3
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 1.2e-32 142.9 88 77.3
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 1.2e-32 142.9 88 77.3
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 1.2e-32 142.9 88 77.3
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.6e-32 142.5 88 73.9
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 4.6e-32 141.0 84 78.6
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 7.8e-32 140.2 88 76.1
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 7.8e-32 140.2 88 76.1
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.3e-31 139.4 84 77.4
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 1.7e-31 139.0 88 76.1
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 3.9e-31 137.9 86 76.7
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 3.9e-31 137.9 86 76.7
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 9.5e-30 133.3 88 73.9
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 9.5e-30 133.3 88 73.9
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 1.2e-29 132.9 88 75.0
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 2.8e-29 131.7 82 76.8
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.8e-29 131.7 67 97.0
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 4.7e-29 131.0 140 54.3
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.2e-29 130.6 131 54.2
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.3e-26 122.9 120 55.0
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 4.1e-25 117.9 60 95.0
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 5.4e-25 117.5 66 83.3
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.1e-24 115.5 88 67.0
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 3.5e-24 114.8 84 64.3
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 4.6e-24 114.4 66 83.3
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.3e-23 112.8 118 57.6
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 3.9e-23 111.3 66 80.3
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.9e-22 109.0 66 78.8
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 8.1e-21 103.6 93 60.2
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 2.9e-18 95.1 56 76.8
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 7.1e-17 90.5 83 48.2
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 1.2e-16 89.7 91 56.0
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.7e-16 88.6 89 56.2
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 3.5e-16 88.2 83 48.2
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 1.2e-13 79.7 71 50.7
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 6.9e-12 73.9 68 57.4
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 1.2e-11 73.2 103 42.7
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 2.6e-11 72.0 66 60.6
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 9.9e-11 70.1 68 54.4
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 4.9e-10 67.8 52 57.7
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.1e-09 66.6 56 60.7
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 9.3e-09 63.5 67 44.8
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 2.7e-08 62.0 71 40.8
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.6e-06 54.3 46 58.7


User provided reference genes

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