Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb417870 Zea mays HOM05D018893 ORTHO05D020945 0.0e+00 2109.7 1087 100.0
Zm00001eb354430 Zea mays HOM05D018893 ORTHO05D020945 3.3e-310 1068.5 779 75.9
Zm00001eb235590 Zea mays HOM05D018893 ORTHO05D020945 2.2e-181 640.6 446 74.9
Os01g0229300 Oryza sativa ssp. japonica HOM05D018893 ORTHO05D020945 4.4e-153 546.6 1123 37.8
Zm00001eb418530 Zea mays HOM05D018893 ORTHO05D020945 1.1e-148 531.9 385 75.8
Zm00001eb418540 Zea mays HOM05D018893 ORTHO05D020945 2.0e-81 308.5 203 77.3
Zm00001eb339260 Zea mays HOM05D018893 ORTHO05D020945 5.1e-69 267.3 258 60.5
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 4.3e-07 61.6 77 39.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 7.3e-07 60.8 106 32.1
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 2.1e-06 59.3 98 35.7
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 3.6e-06 58.5 189 25.4
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 4.7e-06 58.2 73 41.1
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 6.1e-06 57.8 64 39.1
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 6.1e-06 57.8 88 30.7
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 8.0e-06 57.4 98 33.7


User provided reference genes

Program Settings