Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb405720 Zea mays HOM05D000551 ORTHO05D010115 9.5e-54 213.4 118 100.0
Zm00001eb163760 Zea mays HOM05D000551 ORTHO05D010115 9.9e-35 150.2 94 80.9
Zm00001eb195570 Zea mays HOM05D000551 ORTHO05D010115 1.9e-25 119.4 93 66.7
Os12g0120500 Oryza sativa ssp. japonica HOM05D000551 ORTHO05D010115 1.2e-24 116.7 94 67.0
Os11g0121000 Oryza sativa ssp. japonica HOM05D000551 ORTHO05D010115 1.7e-23 112.8 94 70.2
Zm00001eb093780 Zea mays HOM05D000551 ORTHO05D010115 7.3e-22 107.5 60 83.3
Actinidia32580 Actinidia chinensis HOM05D000551 ORTHO05D010115 2.2e-18 95.9 95 51.6
MD04G1180600 Malus domestica HOM05D000551 ORTHO05D010115 2.2e-18 95.9 92 53.3
Oeu063833.1 Olea europaea HOM05D000551 ORTHO05D010115 4.9e-18 94.7 105 46.7
Manes.08G166200 Manihot esculenta HOM05D000551 ORTHO05D010115 6.4e-18 94.4 63 68.3
Dinv25386 Davidia involucrata HOM05D000551 ORTHO05D010115 8.4e-18 94.0 92 51.1
TAR369G0576 Trochodendron aralioides HOM05D000551 ORTHO05D010115 8.4e-18 94.0 103 49.5
Atru.chr8.25 Acer truncatum HOM05D000551 ORTHO05D010115 1.4e-17 93.2 119 48.7
MBI15_g37411_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D010115 1.4e-17 93.2 63 65.1
Cpa.g.sc3081.1 Carica papaya HOM05D000551 ORTHO05D010115 2.4e-17 92.4 64 70.3
MD12G1196000 Malus domestica HOM05D000551 ORTHO05D010115 5.4e-17 91.3 117 46.2
MBI03_g39806_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D010115 7.1e-17 90.9 63 63.5
MBI03_g45386_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D010115 7.1e-17 90.9 63 63.5
Manes.09G119800 Manihot esculenta HOM05D000551 ORTHO05D010115 7.1e-17 90.9 63 65.1
Solyc09g005210.4 Solanum lycopersicum HOM05D000551 ORTHO05D010115 7.1e-17 90.9 70 60.0
MD04G1180700 Malus domestica HOM05D000551 ORTHO05D010115 9.3e-17 90.5 92 52.2
CANSAT35G0119 Cannabis sativa HOM05D000551 ORTHO05D010115 1.6e-16 89.7 62 64.5
MBI03_g31634_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D010115 1.6e-16 89.7 63 61.9
ECA236G2171 Erigeron canadensis HOM05D000551 ORTHO05D010115 2.1e-16 89.4 109 46.8
Nn5g26741 Nelumbo nucifera HOM05D000551 ORTHO05D010115 2.1e-16 89.4 67 67.2
HPP92_018077 Vanilla planifolia HOM05D000551 ORTHO05D010115 2.1e-16 89.4 60 68.3
Cfa016981 Carpinus fangiana HOM05D000551 ORTHO05D010115 2.7e-16 89.0 70 64.3
Prupe.6G300500 Prunus persica HOM05D000551 ORTHO05D010115 3.5e-16 88.6 89 52.8
PGR031G3772 Punica granatum HOM05D000551 ORTHO05D010115 4.6e-16 88.2 95 46.3
HPP92_022892 Vanilla planifolia HOM05D000551 ORTHO05D010115 4.6e-16 88.2 60 66.7
Haze_21226 Corylus avellana HOM05D000551 ORTHO05D010115 6.0e-16 87.8 67 67.2
QL07p030306 Quercus lobata HOM05D000551 ORTHO05D010115 6.0e-16 87.8 66 65.2
QL07p030699 Quercus lobata HOM05D000551 ORTHO05D010115 6.0e-16 87.8 66 65.2
HanXRQChr14g0445851 Helianthus annuus HOM05D000551 ORTHO05D010115 1.0e-15 87.0 98 51.0
Lj2A53T33 Lonicera japonica HOM05D000551 ORTHO05D010115 1.0e-15 87.0 92 51.1
TWI77G0876 Tripterygium wilfordii HOM05D000551 ORTHO05D010115 1.0e-15 87.0 74 59.5
HPP92_022879 Vanilla planifolia HOM05D000551 ORTHO05D010115 1.0e-15 87.0 59 67.8
CAN.G5.37 Capsicum annuum HOM05D000551 ORTHO05D010115 1.3e-15 86.7 70 57.1
Ciclev10012655m.g Citrus clementina HOM05D000551 ORTHO05D010115 2.3e-15 85.9 88 55.7
Ciclev10012659m.g Citrus clementina HOM05D000551 ORTHO05D010115 2.3e-15 85.9 93 48.4
Cc06_g00050 Coffea canephora HOM05D000551 ORTHO05D010115 2.3e-15 85.9 121 43.8
Eucgr.K01316 Eucalyptus grandis HOM05D000551 ORTHO05D010115 2.3e-15 85.9 61 67.2
CDE06G0972 Ceratophyllum demersum HOM05D000551 ORTHO05D010115 3.9e-15 85.1 63 61.9
FAN02G3277 Fragaria x ananassa HOM05D000551 ORTHO05D010115 6.7e-15 84.3 63 63.5
RcHm_v2.0_Chr3g0459331 Rosa chinensis HOM05D000551 ORTHO05D010115 6.7e-15 84.3 63 63.5
HPP92_019039 Vanilla planifolia HOM05D000551 ORTHO05D010115 6.7e-15 84.3 94 47.9
PSO339G4675 Papaver somniferum HOM05D000551 ORTHO05D010115 8.7e-15 84.0 63 58.7
Potri.006G113800 Populus trichocarpa HOM05D000551 ORTHO05D010115 8.7e-15 84.0 64 64.1
ATR0743G024 Amborella trichopoda HOM05D000551 ORTHO05D010115 1.1e-14 83.6 64 59.4
Rhsim04G0119700 Rhododendron simsii HOM05D000551 ORTHO05D010115 1.1e-14 83.6 62 67.7
Sabra06G0088700 Salix brachista HOM05D000551 ORTHO05D010115 1.1e-14 83.6 64 64.1
FvH4_6g09120 Fragaria vesca HOM05D000551 ORTHO05D010115 1.9e-14 82.8 88 52.3
FAN14G4033 Fragaria x ananassa HOM05D000551 ORTHO05D010115 1.9e-14 82.8 88 52.3
TAR633G2400 Trochodendron aralioides HOM05D000551 ORTHO05D010115 1.9e-14 82.8 64 64.1
CDE07G0565 Ceratophyllum demersum HOM05D000551 ORTHO05D010115 3.3e-14 82.0 59 61.0
CDE07G1964 Ceratophyllum demersum HOM05D000551 ORTHO05D010115 3.3e-14 82.0 59 61.0
TWI53G0763 Tripterygium wilfordii HOM05D000551 ORTHO05D010115 3.3e-14 82.0 72 59.7
PGR004G1921 Punica granatum HOM05D000551 ORTHO05D010115 5.6e-14 81.3 84 56.0
FAN05G2046 Fragaria x ananassa HOM05D000551 ORTHO05D010115 7.4e-14 80.9 88 51.1
FAN09G3818 Fragaria x ananassa HOM05D000551 ORTHO05D010115 7.4e-14 80.9 88 51.1
CSS0033774 Camellia sinensis var. sinensis HOM05D000551 ORTHO05D010115 9.6e-14 80.5 65 64.6
PSO384G2030 Papaver somniferum HOM05D000551 ORTHO05D010115 1.3e-13 80.1 63 55.6
vmacro08962 Vaccinium macrocarpon HOM05D000551 ORTHO05D010115 1.6e-13 79.7 66 59.1
Aqoxy2G00657 Aquilegia oxysepala HOM05D000551 ORTHO05D010115 2.1e-13 79.3 101 42.6
Potri.016G143500 Populus trichocarpa HOM05D000551 ORTHO05D010115 2.1e-13 79.3 64 60.9
ATR1127G176 Amborella trichopoda HOM05D000551 ORTHO05D010115 3.7e-13 78.6 92 43.5
Sabra04G0159400 Salix brachista HOM05D000551 ORTHO05D010115 1.4e-12 76.6 59 64.4
Lsat_1_v5_gn_8_108320 Lactuca sativa HOM05D000551 ORTHO05D010115 2.4e-12 75.9 120 41.7
MBI15_g47099_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D010115 2.0e-11 72.8 52 63.5
GSVIVG01029832001 Vitis vinifera HOM05D000551 ORTHO05D010115 2.6e-11 72.4 52 65.4
Sopen09g001190 Solanum pennellii HOM05D000551 ORTHO05D010115 5.8e-11 71.2 59 59.3
Eucgr.A00880 Eucalyptus grandis HOM05D000551 ORTHO05D010115 9.9e-11 70.5 53 66.0
PGSC0003DMG400011797 Solanum tuberosum HOM05D000551 ORTHO05D010115 2.9e-10 68.9 59 57.6
Nitab4.5_0002259g0060 Nicotiana tabacum HOM05D000551 ORTHO05D010115 3.8e-10 68.6 65 53.8
Nitab4.5_0001807g0080 Nicotiana tabacum HOM05D000551 ORTHO05D010115 4.9e-10 68.2 63 57.1
Actinidia20810 Actinidia chinensis HOM05D000551 ORTHO05D010115 8.4e-10 67.4 52 61.5
Zm00001eb162050 Zea mays HOM05D000551 ORTHO05D002273 1.6e-08 63.2 69 50.7
COL.COLO4_19957 Corchorus olitorius HOM05D000551 ORTHO05D002273 3.9e-07 58.5 90 36.7
Gohir.A09G094000 Gossypium hirsutum HOM05D000551 ORTHO05D002273 1.1e-06 57.0 90 35.6
Gohir.D09G093600 Gossypium hirsutum HOM05D000551 ORTHO05D002273 1.1e-06 57.0 90 35.6
Gorai.006G110200 Gossypium raimondii HOM05D000551 ORTHO05D002273 1.1e-06 57.0 90 35.6
Zm00001eb163780 Zea mays HOM05D000551 ORTHO05D002273 1.1e-06 57.0 61 49.2
CDE06G1792 Ceratophyllum demersum HOM05D000551 ORTHO05D002273 1.5e-06 56.6 64 43.8
Duzib150G1638 Durio zibethinus HOM05D000551 ORTHO05D002273 1.5e-06 56.6 90 36.7
Duzib168G0493 Durio zibethinus HOM05D000551 ORTHO05D002273 1.5e-06 56.6 60 46.7
Sp4g20980 Schrenkiella parvula HOM05D000551 ORTHO05D002273 1.5e-06 56.6 60 50.0
Zm00001eb195550 Zea mays HOM05D000551 ORTHO05D002273 1.5e-06 56.6 68 48.5
Zm00001eb195560 Zea mays HOM05D000551 ORTHO05D002273 1.9e-06 56.2 95 37.9
CDE07G0227 Ceratophyllum demersum HOM05D000551 ORTHO05D002273 2.5e-06 55.8 61 45.9
CDE07G0760 Ceratophyllum demersum HOM05D000551 ORTHO05D002273 2.5e-06 55.8 64 43.8
Gohir.A07G107900 Gossypium hirsutum HOM05D000551 ORTHO05D002273 2.5e-06 55.8 59 47.5
Sp6g41220 Schrenkiella parvula HOM05D000551 ORTHO05D002273 2.5e-06 55.8 60 46.7
MBI03_g44225_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D002273 3.3e-06 55.5 57 50.9
Prupe.6G300100 Prunus persica HOM05D000551 ORTHO05D002273 3.3e-06 55.5 91 35.2
Eucgr.A00877 Eucalyptus grandis HOM05D000551 ORTHO05D002273 4.3e-06 55.1 109 37.6
Gohir.D07G111800 Gossypium hirsutum HOM05D000551 ORTHO05D002273 4.3e-06 55.1 59 47.5
Gorai.001G120200 Gossypium raimondii HOM05D000551 ORTHO05D002273 4.3e-06 55.1 59 47.5
A05p07460 Brassica napus HOM05D000551 ORTHO05D002273 5.6e-06 54.7 59 50.8
HanXRQChr15g0464631 Helianthus annuus HOM05D000551 ORTHO05D002273 5.6e-06 54.7 85 38.8
MBI15_g05580_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D002273 7.4e-06 54.3 57 49.1


User provided reference genes

Program Settings