Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb009830 Zea mays HOM05D000096 ORTHO05D000045 1.0e-56 223.0 100 100.0
Zm00001eb399170 Zea mays HOM05D000096 ORTHO05D000045 1.0e-56 223.0 100 100.0
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-22 109.0 96 46.9
Zm00001eb340200 Zea mays HOM05D008270 ORTHO05D000045 2.1e-22 109.0 91 47.3
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-21 106.3 97 48.5
ECA238G2729 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.4e-21 105.5 97 46.4
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 2.4e-21 105.5 91 47.3
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 6.9e-21 104.0 93 47.3
Zm00001eb036830 Zea mays HOM05D008270 ORTHO05D000045 6.9e-21 104.0 91 46.2
Zm00001eb238500 Zea mays HOM05D008270 ORTHO05D000045 6.9e-21 104.0 91 46.2
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.2e-20 103.2 89 47.2
Zm00001eb210710 Zea mays HOM05D008270 ORTHO05D000045 2.0e-20 102.4 91 45.1
Zm00001eb319180 Zea mays HOM05D008270 ORTHO05D000045 2.0e-20 102.4 91 45.1
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.8e-19 98.2 91 45.1
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-19 97.4 91 44.0
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 1.1e-18 96.7 100 40.0
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 1.9e-18 95.9 87 46.0
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.2e-18 94.7 91 44.0
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 4.2e-18 94.7 90 48.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.1e-18 94.0 107 40.2
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.1e-18 94.0 107 40.2
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.1e-18 94.0 107 40.2
SGA_v2.0_scaffold257G45688 Striga asiatica HOM05D000011 ORTHO05D000018 7.1e-18 94.0 78 53.8
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-18 94.0 91 48.4
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.3e-18 93.6 91 44.0
CiPaw.10G073400 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.3e-18 93.6 91 44.0
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 1.2e-17 93.2 96 42.7
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 1.2e-17 93.2 96 42.7
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 2.7e-17 92.0 91 40.7
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 2.7e-17 92.0 91 44.0
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 2.7e-17 92.0 96 42.7
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 3.5e-17 91.7 91 40.7
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 6.0e-17 90.9 91 41.8
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 6.0e-17 90.9 88 45.5
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.9e-17 90.5 91 42.9
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-16 90.1 91 42.9
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-16 90.1 91 42.9
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 1.8e-16 89.4 91 40.7
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-16 89.0 96 41.7
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 3.0e-16 88.6 89 44.9
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 3.0e-16 88.6 96 40.6
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.9e-16 88.2 91 40.7
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 3.9e-16 88.2 90 43.3
CAN.G834.13 Capsicum annuum HOM05D000096 ORTHO05D000045 6.7e-16 87.4 93 40.9
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.7e-16 87.0 91 41.8
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-15 86.7 91 40.7
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-15 86.3 91 41.8
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-15 85.9 90 42.2
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-15 85.5 90 42.2
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.3e-15 85.1 91 41.8
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 5.6e-15 84.3 73 45.2
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 7.4e-15 84.0 90 41.1
Migut.M00581 Erythranthe guttata HOM05D000096 ORTHO05D000045 9.6e-15 83.6 88 40.9
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 9.6e-15 83.6 91 39.6
EL10Ac1g01294 Beta vulgaris HOM05D000096 ORTHO05D000045 1.3e-14 83.2 91 41.8
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 1.3e-14 83.2 85 41.2
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.3e-14 83.2 91 39.6
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-14 83.2 91 40.7
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-14 83.2 91 40.7
Oeu049358.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-14 83.2 91 41.8
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.3e-14 83.2 90 42.2
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-14 82.8 90 40.0
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 2.1e-14 82.4 91 40.7
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-14 82.0 89 39.3
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-14 81.6 91 39.6
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 3.7e-14 81.6 90 40.0
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 4.8e-14 81.3 90 41.1
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 6.2e-14 80.9 90 40.0
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.1e-14 80.5 93 39.8
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 8.1e-14 80.5 90 41.1
Oeu037932.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-13 80.1 82 42.7
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-13 79.7 90 41.1
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 1.4e-13 79.7 81 42.0
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.4e-13 79.7 91 41.8
EL10Ac5g11698 Beta vulgaris HOM05D007854 ORTHO05D010168 1.8e-13 79.3 81 44.4
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-13 79.0 90 41.1
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-13 79.0 92 39.1
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 4.0e-13 78.2 90 40.0
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.0e-13 78.2 88 40.9
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 5.3e-13 77.8 90 41.1
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 5.3e-13 77.8 90 40.0
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 5.3e-13 77.8 81 42.0
ECA240G2992 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.3e-13 77.8 65 49.2
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 5.3e-13 77.8 90 40.0
QL11p039347 Quercus lobata HOM05D000096 ORTHO05D000045 6.9e-13 77.4 88 37.5
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 9.0e-13 77.0 90 40.0
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 9.0e-13 77.0 94 39.4
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 9.0e-13 77.0 90 37.8
CAN.G414.4 Capsicum annuum HOM05D000096 ORTHO05D000045 1.2e-12 76.6 87 40.2
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-12 76.3 90 38.9
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-12 76.3 90 38.9
CANSAT11G0363 Cannabis sativa HOM05D000096 ORTHO05D000045 1.5e-12 76.3 68 44.1
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-12 76.3 90 36.7
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 1.5e-12 76.3 84 44.0
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 2.0e-12 75.9 90 40.0
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-12 75.5 90 40.0
Oeu053514.1 Olea europaea HOM05D000096 ORTHO05D000045 3.4e-12 75.1 80 42.5
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 3.4e-12 75.1 92 35.9
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-11 73.6 83 39.8
Oeu023669.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-11 73.2 80 41.2
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 3.8e-11 71.6 88 38.6
Oeu031271.1 Olea europaea HOM05D000096 ORTHO05D000045 3.8e-11 71.6 88 38.6
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 6.5e-11 70.9 77 40.3
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 8.4e-11 70.5 90 38.9
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-11 70.5 90 37.8
Oeu043848.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-10 69.7 93 35.5
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.5e-10 68.9 82 39.0
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-10 68.9 90 35.6
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-10 68.9 88 35.2
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-10 68.2 67 43.3
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.5e-10 67.8 64 43.8
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 5.5e-10 67.8 90 33.3
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 7.1e-10 67.4 65 46.2
SMO269G0030 Selaginella moellendorffii HOM05D000096 ORTHO05D000045 7.1e-10 67.4 78 39.7
Nn1g02481 Nelumbo nucifera HOM05D000096 ORTHO05D000045 9.3e-10 67.0 73 43.8
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 2.1e-09 65.9 79 40.5
Medtr0030s0140 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-09 65.9 77 31.2
Oeu057797.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-09 65.9 87 36.8
Aqoxy3G01378 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 3.5e-09 65.1 68 44.1
SMO116G0061 Selaginella moellendorffii HOM05D000096 ORTHO05D010168 4.6e-09 64.7 76 36.8
CANSAT80G1310 Cannabis sativa HOM05D000096 ORTHO05D000045 6.0e-09 64.3 60 45.0
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 6.0e-09 64.3 82 35.4
SMO146G0191 Selaginella moellendorffii HOM05D000096 ORTHO05D010168 7.9e-09 63.9 86 34.9
Medtr0003s0430 Medicago truncatula HOM05D000096 ORTHO05D020878 1.3e-08 63.2 98 36.7
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-08 63.2 74 39.2
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-08 63.2 74 39.2
Zm00001eb073960 Zea mays HOM05D008270 ORTHO05D000045 1.3e-08 63.2 67 38.8
Zm00001eb354070 Zea mays HOM05D008270 ORTHO05D000045 1.3e-08 63.2 67 38.8
EL10Ac4g08472 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-08 62.8 76 40.8
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-08 62.8 76 38.2
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-08 62.4 91 37.4
FvH4_6g14351 Fragaria vesca HOM05D000096 ORTHO05D000045 2.3e-08 62.4 92 38.0
PSO063G4686 Papaver somniferum HOM05D000096 ORTHO05D000045 2.3e-08 62.4 67 38.8
Zm00001eb246380 Zea mays HOM05D043488 ORTHO05D441847 2.3e-08 62.4 33 87.9
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 5.1e-08 61.2 92 37.0
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 5.1e-08 61.2 76 38.2
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.7e-08 60.8 58 46.6
Oeu027403.1 Olea europaea HOM05D000096 ORTHO05D000045 6.7e-08 60.8 60 38.3
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 6.7e-08 60.8 75 36.0
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 6.7e-08 60.8 74 39.2
COL.COLO4_35927 Corchorus olitorius HOM05D000096 ORTHO05D000045 1.1e-07 60.1 67 43.3
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-07 60.1 74 39.2
TPR.G40020 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-07 60.1 74 40.5
Zm00001eb088010 Zea mays HOM05D008270 ORTHO05D000045 1.1e-07 60.1 67 37.3
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.9e-07 59.3 92 33.7
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 2.5e-07 58.9 89 32.6
AUR62041752 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.3e-07 58.5 82 35.4
AUR62044577 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.3e-07 58.5 82 35.4
COL.COLO4_30364 Corchorus olitorius HOM05D000096 ORTHO05D000045 3.3e-07 58.5 67 43.3
TPR.G36056 Trifolium pratense HOM05D000096 ORTHO05D000045 3.3e-07 58.5 74 36.5
EL10Ac7g17587 Beta vulgaris HOM05D000096 ORTHO05D000045 7.4e-07 57.4 70 34.3
AUR62041682 Chenopodium quinoa HOM05D000096 ORTHO05D000045 7.4e-07 57.4 82 34.1
PGSC0003DMG400033370 Solanum tuberosum HOM05D000096 ORTHO05D000045 7.4e-07 57.4 73 41.1
HanXRQChr10g0297001 Helianthus annuus HOM05D000096 ORTHO05D000045 9.6e-07 57.0 82 34.1
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 1.3e-06 56.6 92 32.6
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 1.3e-06 56.6 97 32.0
A08p06590 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-06 56.2 85 35.3
AUR62031758 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.6e-06 56.2 82 32.9
Rhsim01G0136800 Rhododendron simsii HOM05D001530 ORTHO05D004168 1.6e-06 56.2 82 34.1
Rhsim02G0030300 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.6e-06 56.2 74 36.5
CAN.G411.9 Capsicum annuum HOM05D000096 ORTHO05D000045 2.1e-06 55.8 73 37.0
Rhsim06G0045600 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.1e-06 55.8 74 36.5
Rhsim11G0005800 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.1e-06 55.8 74 36.5
RhsimUnG0164500 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.1e-06 55.8 74 36.5
BolC5t33121H Brassica oleracea HOM05D000096 ORTHO05D000045 2.8e-06 55.5 89 33.7
BraA08t32675Z Brassica rapa HOM05D000096 ORTHO05D000045 2.8e-06 55.5 85 35.3
Rhsim07G0256200 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.8e-06 55.5 74 37.8
Lj4g0023169 Lotus japonicus HOM05D000096 ORTHO05D000045 3.7e-06 55.1 86 33.7
PSO063G4569 Papaver somniferum HOM05D000096 ORTHO05D000045 3.7e-06 55.1 88 35.2
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.7e-06 55.1 76 39.5
Dinv19538 Davidia involucrata HOM05D015775 ORTHO05D004973 4.8e-06 54.7 56 37.5
C07p07960 Brassica napus HOM05D000096 ORTHO05D000045 6.2e-06 54.3 89 36.0
BolC7t41213H Brassica oleracea HOM05D000096 ORTHO05D000045 6.2e-06 54.3 89 36.0
BraA07t28121Z Brassica rapa HOM05D000096 ORTHO05D000045 6.2e-06 54.3 89 36.0
Aqoxy5G03346 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 8.2e-06 53.9 83 32.5
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 8.2e-06 53.9 76 34.2
PSO170G4068 Papaver somniferum HOM05D000096 ORTHO05D000045 8.2e-06 53.9 65 36.9
PSO339G0459 Papaver somniferum HOM05D000096 ORTHO05D000045 8.2e-06 53.9 77 37.7
Rhsim09G0095900 Rhododendron simsii HOM05D000096 ORTHO05D000045 8.2e-06 53.9 75 37.3


User provided reference genes

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