Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb398950 Zea mays HOM05D008243 ORTHO05D443637 4.7e-107 391.3 220 100.0
Zm00001eb118050 Zea mays HOM05D008243 ORTHO05D445343 1.8e-61 240.0 174 79.9
Zm00001eb298840 Zea mays HOM05D008243 ORTHO05D019329 5.2e-37 158.7 167 56.3
Zm00001eb304920 Zea mays HOM05D008243 ORTHO05D019329 2.0e-36 156.8 167 58.1
Zm00001eb118040 Zea mays HOM05D008243 ORTHO05D019329 4.4e-36 155.6 167 55.7
Zm00001eb298890 Zea mays HOM05D008243 ORTHO05D019329 1.6e-33 147.1 166 54.8
Zm00001eb298830 Zea mays HOM05D008243 ORTHO05D019329 4.5e-33 145.6 166 54.8
Zm00001eb298790 Zea mays HOM05D008243 ORTHO05D445796 4.0e-29 132.5 186 46.8
Os07g0117200 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 1.8e-26 123.6 166 48.2
Os07g0116900 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 3.1e-26 122.9 166 47.0
Os07g0117000 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 3.5e-25 119.4 166 45.2
Os07g0117400 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 1.7e-24 117.1 166 46.4
Os05g0533301 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 2.5e-23 113.2 171 42.7
Os07g0116800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 1.4e-21 107.5 170 42.9
Os01g0720900 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 2.0e-20 103.6 171 39.2
Os01g0721800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 7.5e-20 101.7 174 42.0
Os07g0118000 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 2.2e-19 100.1 132 45.5
Os07g0117300 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 2.9e-19 99.8 178 34.3
Os01g0721400 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 6.4e-19 98.6 173 42.2
Zm00001eb298930 Zea mays HOM05D008243 ORTHO05D013901 6.4e-19 98.6 80 66.2
Os01g0721000 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D295345 1.1e-18 97.8 166 38.0
Os07g0117350 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 4.6e-17 92.4 132 43.9
Os01g0721500 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 5.9e-17 92.0 171 38.0
Zm00001eb428090 Zea mays HOM05D008243 ORTHO05D442284 7.8e-17 91.7 170 38.8
Os01g0721300 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 1.3e-16 90.9 171 39.2
Os01g0721200 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 1.7e-16 90.5 177 40.1
Os05g0533400 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 1.7e-16 90.5 167 35.9
Os05g0533450 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D297624 1.7e-16 90.5 135 38.5
Os07g0117800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 1.2e-14 84.3 132 40.9
Os02g0627900 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D018067 1.6e-14 84.0 172 39.5
Os01g0355700 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 8.0e-14 81.6 134 38.8
Os11g0161100 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D292968 1.8e-13 80.5 175 36.6
Zm00001eb154680 Zea mays HOM05D008243 ORTHO05D443846 6.8e-13 78.6 183 31.7
Zm00001eb361650 Zea mays HOM05D008243 ORTHO05D018067 1.5e-12 77.4 187 32.6
Os07g0117900 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 2.6e-12 76.6 172 32.0
Zm00001eb224270 Zea mays HOM05D008243 ORTHO05D017094 2.6e-12 76.6 166 31.3
Os11g0161800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D299955 1.7e-11 73.9 171 35.1
Os11g0160900 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D299875 1.9e-10 70.5 175 33.7
Os10g0136150 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 2.4e-10 70.1 168 35.7
Zm00001eb361660 Zea mays HOM05D008243 ORTHO05D018067 2.4e-10 70.1 189 31.2
Os10g0134700 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 5.4e-10 68.9 167 34.7
Os01g0581800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D299436 2.7e-09 66.6 164 32.9
Os11g0161000 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D295802 2.7e-09 66.6 173 32.9
Zm00001eb137570 Zea mays HOM05D000009 ORTHO05D037249 3.5e-09 66.2 157 28.0
Os10g0133800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 7.8e-09 65.1 164 29.3
Os11g0161133 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D296732 1.0e-08 64.7 172 32.6
Os10g0133600 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D293976 1.7e-08 63.9 164 30.5
Os10g0133166 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D295860 5.0e-08 62.4 170 29.4
Os10g0134033 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 6.6e-08 62.0 173 28.3
Os10g0135100 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 8.6e-08 61.6 168 28.6
Os01g0721100 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D295660 1.9e-07 60.5 112 40.2
Os10g0134500 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 1.9e-07 60.5 169 29.0
Os01g0720800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D013901 3.3e-07 59.7 103 36.9
Os01g0256300 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D293560 4.3e-07 59.3 166 34.9
Os10g0134800 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 2.8e-06 56.6 168 28.0


User provided reference genes

Program Settings