Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 1.9e-301 1038.5 559 100.0
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 2.7e-191 672.5 531 74.2
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 2.8e-31 141.0 308 31.8
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 2.7e-21 107.8 453 27.4
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.9e-20 104.4 314 28.7
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 6.6e-20 103.2 272 31.6
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 6.6e-20 103.2 309 30.4
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.5e-19 102.1 385 27.0
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 2.5e-19 101.3 284 30.6
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 7.2e-19 99.8 259 32.0
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 2.1e-18 98.2 467 28.3
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.1e-18 98.2 522 26.2
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 3.6e-18 97.4 284 28.5
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 4.7e-18 97.1 268 29.9
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 6.1e-18 96.7 275 29.8
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 8.0e-18 96.3 259 32.0
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.4e-17 95.5 373 26.3
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.4e-17 95.5 374 28.6
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 1.8e-17 95.1 264 30.3
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 1.8e-17 95.1 261 29.9
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 1.8e-17 95.1 386 28.8
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 2.3e-17 94.7 277 30.0
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 3.0e-17 94.4 255 29.8
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 4.0e-17 94.0 425 25.4
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.0e-17 94.0 373 26.0
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 4.0e-17 94.0 488 26.0
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 6.8e-17 93.2 283 28.3
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 8.9e-17 92.8 288 28.8
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 8.9e-17 92.8 429 26.3
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.9e-17 92.8 373 26.8
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 8.9e-17 92.8 263 30.0
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 1.2e-16 92.4 415 26.7
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.2e-16 92.4 317 29.0
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.5e-16 92.0 311 28.3
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 1.5e-16 92.0 311 28.3
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 3.4e-16 90.9 479 26.5
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.4e-16 90.9 373 26.5
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.7e-15 88.6 283 25.4
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 1.7e-15 88.6 445 27.9
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 1.7e-15 88.6 309 27.8
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.7e-15 87.4 373 26.3
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 3.7e-15 87.4 427 25.1
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 4.9e-15 87.0 408 27.9
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 8.3e-15 86.3 489 26.4
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 8.3e-15 86.3 425 26.1
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 1.4e-14 85.5 283 29.0
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 3.2e-14 84.3 441 26.1
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 4.1e-14 84.0 248 27.8
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 7.0e-14 83.2 257 27.6
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 7.0e-14 83.2 364 28.0
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 9.2e-14 82.8 301 25.9
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 1.2e-13 82.4 295 28.5
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 1.2e-13 82.4 293 27.3
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 1.2e-13 82.4 246 28.5
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 2.0e-13 81.6 479 25.5
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 3.5e-13 80.9 255 28.6
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 5.9e-13 80.1 276 26.8
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 1.0e-12 79.3 312 26.6
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 1.0e-12 79.3 276 26.8
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 1.3e-12 79.0 248 29.4
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 1.3e-12 79.0 357 25.8
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 1.7e-12 78.6 358 25.7
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 2.3e-12 78.2 275 26.5
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 5.0e-12 77.0 268 26.5
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 1.1e-11 75.9 388 25.5
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.5e-11 75.5 247 29.1
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 3.3e-11 74.3 285 25.3
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 3.3e-11 74.3 310 25.5
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 7.3e-11 73.2 279 26.2
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 9.5e-11 72.8 371 24.0
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 1.2e-10 72.4 358 27.1
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 1.2e-10 72.4 292 27.7
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 1.2e-10 72.4 272 26.8
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 1.6e-10 72.0 290 26.2
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 2.8e-10 71.2 371 25.6
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 4.7e-10 70.5 129 37.2
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.0e-09 69.3 268 24.6
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.0e-09 69.3 272 25.4
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.4e-09 68.9 460 25.9
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.8e-09 68.6 419 25.3
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 2.3e-09 68.2 237 27.8
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 3.1e-09 67.8 313 24.6
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 3.1e-09 67.8 294 22.1
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 6.8e-09 66.6 344 26.7
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.2e-08 65.9 297 27.6
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 1.2e-08 65.9 316 25.6
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 1.5e-08 65.5 286 23.8
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.5e-08 65.5 268 24.6
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 3.4e-08 64.3 239 22.2
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 7.5e-08 63.2 308 24.7
Nitab4.5_0007954g0010 Nicotiana tabacum HOM05D005220 ORTHO05D006082 1.3e-07 62.4 259 23.9
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.7e-07 62.0 305 22.6
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.7e-07 62.0 257 24.5
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 2.2e-07 61.6 272 23.5
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 2.2e-07 61.6 239 26.4
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 2.9e-07 61.2 240 30.0
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 3.7e-07 60.8 68 42.6
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 3.7e-07 60.8 68 42.6
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 6.4e-07 60.1 235 23.0
Nitab4.5_0000212g0170 Nicotiana tabacum HOM05D005220 ORTHO05D006082 8.3e-07 59.7 296 22.3
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 8.3e-07 59.7 64 37.5
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 1.1e-06 59.3 66 45.5
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 1.4e-06 58.9 293 26.6
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 1.9e-06 58.5 245 20.4
MSTRG.23894 Avicennia marina HOM05D005220 ORTHO05D006082 1.9e-06 58.5 239 23.4
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 1.9e-06 58.5 69 39.1
Peaxi162Scf00629g00420 Petunia axillaris HOM05D005220 ORTHO05D006082 5.4e-06 57.0 280 25.0
QL10p018718 Quercus lobata HOM05D005220 ORTHO05D006082 5.4e-06 57.0 274 23.4
vmacro05657 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 5.4e-06 57.0 91 31.9
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 7.0e-06 56.6 243 21.0
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 7.0e-06 56.6 69 34.8
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 9.2e-06 56.2 234 23.9
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 9.2e-06 56.2 275 25.5


User provided reference genes

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