Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb391260 Zea mays HOM05D000100 ORTHO05D033826 9.3e-31 136.3 74 100.0
Zm00001eb114130 Zea mays HOM05D000100 ORTHO05D000052 5.6e-20 100.5 76 78.9
Zm00001eb165630 Zea mays HOM05D000100 ORTHO05D000052 4.0e-18 94.4 76 72.4
Os11g0599200 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 2.0e-17 92.0 76 69.7
Zm00001eb167530 Zea mays HOM05D000100 ORTHO05D000052 7.6e-17 90.1 76 71.1
HPP92_020019 Vanilla planifolia HOM05D000100 ORTHO05D000052 4.5e-09 64.3 73 54.8
HPP92_003988 Vanilla planifolia HOM05D000100 ORTHO05D000052 2.9e-08 61.6 76 48.7
HPP92_024022 Vanilla planifolia HOM05D000100 ORTHO05D000052 6.5e-08 60.5 76 50.0
THA.LOC104817049 Tarenaya hassleriana HOM05D000100 ORTHO05D000052 1.9e-07 58.9 74 50.0
unitig_22.g6729 Utricularia gibba HOM05D000100 ORTHO05D000052 2.5e-07 58.5 74 47.3
Os02g0242900 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 9.3e-07 56.6 73 47.9
Os02g0243300 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 1.2e-06 56.2 76 44.7
THA.LOC104825873 Tarenaya hassleriana HOM05D000100 ORTHO05D000052 2.7e-06 55.1 77 48.1
Manes.05G025000 Manihot esculenta HOM05D000100 ORTHO05D000052 3.5e-06 54.7 77 45.5
THA.LOC104825872 Tarenaya hassleriana HOM05D000100 ORTHO05D000052 3.5e-06 54.7 74 47.3
Zm00001eb204630 Zea mays HOM05D000100 ORTHO05D000052 3.5e-06 54.7 76 44.7
CARHR001020 Cardamine hirsuta HOM05D000100 ORTHO05D000052 6.0e-06 53.9 77 46.8
Os02g0242100 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 6.0e-06 53.9 76 44.7
Os01g0620800 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 7.9e-06 53.5 73 42.5


User provided reference genes

Program Settings