Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 0.0e+00 2053.9 1054 100.0
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 0.0e+00 1401.7 1017 72.7
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 2.1e-245 853.2 1016 45.7
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 1.8e-241 840.1 1020 46.4
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 1.8e-241 840.1 1021 46.7
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 9.9e-227 791.2 1011 42.5
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 5.4e-225 785.4 1014 43.6
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 3.5e-224 782.7 1018 42.1
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 7.3e-222 775.0 1011 42.0
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 1.4e-220 770.8 1019 42.6
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 2.0e-219 766.9 1019 43.3
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 9.9e-219 764.6 1007 41.9
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 4.9e-218 762.3 1007 42.0
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 1.1e-217 761.1 1025 43.1
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 1.4e-217 760.8 1007 42.1
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 5.4e-217 758.8 1007 41.9
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.1e-214 751.1 1009 41.7
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 2.8e-213 746.5 1018 41.3
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 8.1e-213 745.0 1008 42.2
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 1.4e-212 744.2 1011 41.8
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 5.2e-212 742.3 1025 41.5
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.2e-211 741.1 1020 41.5
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 3.4e-211 739.6 1020 40.7
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 3.8e-210 736.1 1006 41.3
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 1.4e-209 734.2 973 41.6
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 5.4e-209 732.3 1006 41.2
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 2.7e-208 729.9 1016 40.2
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 4.6e-208 729.2 943 42.6
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 6.0e-208 728.8 1009 40.3
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 1.3e-205 721.1 1008 40.4
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 1.6e-205 720.7 1017 39.9
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 3.6e-205 719.5 1007 40.5
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 1.4e-204 717.6 1012 39.9
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 2.4e-204 716.8 1007 39.6
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 3.1e-204 716.5 1010 39.6
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 2.6e-203 713.4 1007 39.7
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 2.9e-202 709.9 1023 39.8
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 3.8e-202 709.5 1015 40.1
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.1e-201 708.0 1003 39.1
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 1.1e-201 708.0 1014 40.0
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 9.3e-201 704.9 1003 39.2
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 7.9e-200 701.8 1003 39.1
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 1.3e-199 701.0 1001 40.0
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 6.7e-199 698.7 885 42.9
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 8.7e-199 698.4 1010 37.7
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 1.1e-198 698.0 1023 40.1
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 1.5e-198 697.6 1003 39.1
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 1.9e-198 697.2 1007 40.2
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.8e-197 693.3 1014 39.1
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 6.2e-197 692.2 1020 38.4
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 1.5e-195 687.6 1010 38.6
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 2.2e-194 683.7 1007 39.2
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 1.9e-193 680.6 978 39.8
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 7.1e-193 678.7 1004 39.1
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 6.7e-191 672.2 1004 38.0
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 1.9e-190 670.6 1008 38.9
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 4.3e-190 669.5 1010 37.1
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 5.6e-190 669.1 1005 38.7
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.1e-185 654.8 1008 37.7
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 2.5e-185 653.7 1026 38.1
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 2.3e-183 647.1 968 39.5
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 5.7e-182 642.5 1004 37.8
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.2e-181 640.6 1009 37.8
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 6.3e-181 639.0 1009 38.6
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 8.2e-181 638.6 1005 38.7
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 9.0e-180 635.2 1005 38.5
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 4.5e-179 632.9 1022 37.8
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 7.2e-177 625.5 1045 36.9
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 4.6e-176 622.9 952 39.2
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 3.0e-175 620.2 974 38.7
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 2.5e-174 617.1 864 40.2
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 4.3e-174 616.3 1003 36.8
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 1.3e-173 614.8 990 37.3
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.3e-173 614.8 1035 36.0
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 2.8e-173 613.6 1027 36.6
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.8e-173 612.8 1006 36.9
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 1.4e-172 611.3 1004 37.2
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 2.6e-171 607.1 967 36.9
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 2.6e-171 607.1 967 36.9
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 4.5e-171 606.3 1017 36.5
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.9e-169 600.9 968 36.6
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.0e-166 590.9 1015 35.6
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 3.3e-166 590.1 747 43.8
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 5.3e-164 582.8 856 37.0
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.4e-161 574.7 1004 35.3
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 6.1e-160 569.3 1007 35.5
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 7.0e-156 555.8 842 38.5
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 4.7e-152 543.1 966 34.1
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 6.7e-151 539.3 998 34.6
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 3.8e-146 523.5 1046 33.7
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 7.2e-145 519.2 760 39.6
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 5.4e-140 503.1 794 35.6
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.7e-138 498.0 714 39.6
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 2.6e-134 484.2 707 39.5
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 1.1e-121 442.2 622 39.5
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 4.7e-104 383.6 703 34.6
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.8e-96 357.8 606 37.0
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 4.0e-95 354.0 491 40.9
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 8.7e-90 336.3 754 32.1
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 6.9e-79 300.1 389 41.9
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 3.8e-77 294.3 455 37.4
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.7e-69 268.9 374 39.0
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 5.1e-66 257.3 383 37.9
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 1.1e-63 249.6 349 40.1
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 3.4e-62 244.6 602 30.9
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 6.7e-58 230.3 986 23.0
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 6.7e-58 230.3 1063 24.0
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 8.2e-56 223.4 371 35.6
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 8.2e-48 196.8 203 50.2
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 2.4e-47 195.3 191 48.7
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.1e-39 169.9 189 47.6
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.5e-38 164.5 224 41.1
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.1e-36 159.8 218 41.3
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 1.7e-29 136.0 128 50.8
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 5.4e-23 114.4 109 48.6
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 7.0e-23 114.0 138 46.4
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 8.6e-21 107.1 184 35.3
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 5.2e-18 97.8 109 46.8
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 2.2e-16 92.4 225 25.8
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 4.7e-11 74.7 75 50.7
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 1.0e-10 73.6 221 24.0
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.1e-10 72.0 119 37.0
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.4e-07 63.2 63 46.0
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 3.2e-07 62.0 102 35.3


User provided reference genes

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