Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb386510 Zea mays HOM05D006756 ORTHO05D001869 0.0e+00 1203.0 620 100.0
Os06g0606900 Oryza sativa ssp. japonica HOM05D006756 ORTHO05D001869 1.3e-90 338.2 436 51.8
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 1.2e-25 122.5 588 28.1
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 4.4e-25 120.6 598 27.4
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 4.6e-22 110.5 603 27.0
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 5.9e-22 110.2 605 26.9
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.7e-21 108.6 719 24.6
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 6.6e-21 106.7 598 26.3
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 1.9e-20 105.1 704 26.3
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 1.9e-20 105.1 755 24.6
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 7.3e-20 103.2 602 25.9
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 1.6e-19 102.1 593 25.3
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 3.6e-19 100.9 677 26.3
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 6.2e-19 100.1 600 25.8
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 8.0e-19 99.8 702 26.8
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 1.0e-18 99.4 585 26.2
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.8e-18 98.6 714 24.2
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 3.1e-18 97.8 548 28.3
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 6.8e-18 96.7 449 27.8
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 8.9e-18 96.3 539 25.4
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 8.9e-18 96.3 472 26.9
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 1.2e-17 95.9 550 26.7
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 1.2e-17 95.9 742 24.7
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 2.0e-17 95.1 577 27.2
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 2.6e-17 94.7 546 26.7
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 3.4e-17 94.4 577 23.7
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 4.4e-17 94.0 600 25.5
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 5.8e-17 93.6 610 23.8
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 1.7e-16 92.0 571 25.2
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 2.2e-16 91.7 582 24.2
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 2.9e-16 91.3 717 25.1
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 3.7e-16 90.9 690 24.9
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 8.3e-16 89.7 706 25.9
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 1.4e-15 89.0 640 25.2
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 1.9e-15 88.6 705 23.8
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 9.2e-15 86.3 712 23.2
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 9.2e-15 86.3 581 25.5
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 9.2e-15 86.3 569 26.0
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 3.5e-14 84.3 608 25.8
Potri.008G014800 Populus trichocarpa HOM05D003044 ORTHO05D001869 3.5e-14 84.3 534 26.0
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 7.8e-14 83.2 363 26.4
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 1.0e-13 82.8 507 26.8
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 5.0e-13 80.5 576 24.5
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 5.0e-13 80.5 591 26.6
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 1.1e-12 79.3 583 22.8
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 2.5e-12 78.2 358 28.5
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 2.5e-12 78.2 611 24.2
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 3.3e-12 77.8 696 23.4
Sabra08G0009300 Salix brachista HOM05D003044 ORTHO05D001869 2.1e-11 75.1 482 26.6
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 2.8e-11 74.7 555 25.2
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 2.8e-11 74.7 465 26.2
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 8.1e-11 73.2 541 25.9
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 1.1e-10 72.8 668 24.0
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 1.4e-10 72.4 573 25.3
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.4e-10 72.4 474 25.5
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.8e-10 72.0 544 23.7
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 3.1e-10 71.2 466 26.0
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 4.0e-10 70.9 456 25.9
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 4.0e-10 70.9 446 24.2
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 6.8e-10 70.1 467 24.4
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 1.2e-09 69.3 385 26.8
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 1.2e-09 69.3 363 25.9
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 1.5e-09 68.9 644 23.9
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 2.0e-09 68.6 623 23.3
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 9.8e-09 66.2 489 24.7
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 9.8e-09 66.2 496 24.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.3e-08 65.9 663 22.6
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 1.3e-08 65.9 200 30.5
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 1.7e-08 65.5 376 26.1
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 1.7e-08 65.5 460 24.6
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 1.7e-08 65.5 621 24.5
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 1.7e-08 65.5 616 23.4
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 2.2e-08 65.1 590 23.7
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 2.2e-08 65.1 383 25.6
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 2.9e-08 64.7 636 22.6
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 2.9e-08 64.7 372 24.7
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 3.7e-08 64.3 728 22.8
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 3.7e-08 64.3 523 22.6
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 8.3e-08 63.2 466 24.5
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 1.1e-07 62.8 718 21.7
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 1.1e-07 62.8 558 22.9
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 1.1e-07 62.8 345 25.8
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 1.4e-07 62.4 618 23.9
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 1.4e-07 62.4 200 29.0
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 1.9e-07 62.0 191 29.3
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 1.9e-07 62.0 519 23.7
Aqoxy1G00609 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 2.4e-07 61.6 301 25.2
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 2.4e-07 61.6 486 24.3
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 5.4e-07 60.5 326 25.2
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 7.1e-07 60.1 589 22.6
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 9.2e-07 59.7 368 25.0
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 9.2e-07 59.7 368 25.0
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 1.2e-06 59.3 529 22.1
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 1.2e-06 59.3 465 24.9
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.6e-06 58.9 710 23.7
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 2.1e-06 58.5 527 23.7
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 3.5e-06 57.8 420 24.8
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 4.6e-06 57.4 471 22.9
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 4.6e-06 57.4 541 25.0
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 4.6e-06 57.4 551 22.0
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 4.6e-06 57.4 413 26.6
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 6.0e-06 57.0 448 24.6
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 6.0e-06 57.0 467 24.8


User provided reference genes

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