Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 3.1e-69 265.0 133 100.0
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 3.4e-68 261.5 133 99.2
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 1.8e-64 249.2 131 93.9
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 6.5e-51 204.1 101 98.0
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 2.0e-47 192.6 113 89.4
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 4.5e-44 181.4 133 65.4
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 1.7e-43 179.5 133 64.7
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 5.0e-43 177.9 132 60.6
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 1.4e-42 176.4 133 63.9
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.9e-42 176.0 133 61.7
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 1.9e-42 176.0 133 64.7
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.5e-42 175.6 133 63.9
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 2.5e-42 175.6 133 63.9
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 2.5e-42 175.6 133 62.4
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 3.2e-42 175.3 132 63.6
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 3.2e-42 175.3 133 63.2
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 5.5e-42 174.5 133 63.2
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 7.2e-42 174.1 133 63.9
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 9.4e-42 173.7 132 64.4
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 1.6e-41 172.9 133 63.2
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 1.6e-41 172.9 133 63.2
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 1.6e-41 172.9 133 62.4
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.1e-41 172.6 133 60.9
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 2.7e-41 172.2 133 63.9
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.7e-41 172.2 133 60.9
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.7e-41 172.2 133 60.9
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.7e-41 172.2 133 62.4
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 2.7e-41 172.2 133 61.7
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 3.6e-41 171.8 133 60.9
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 4.7e-41 171.4 132 61.4
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 4.7e-41 171.4 133 62.4
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 4.7e-41 171.4 133 60.9
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 4.7e-41 171.4 133 62.4
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 4.7e-41 171.4 133 62.4
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 6.1e-41 171.0 133 62.4
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 6.1e-41 171.0 133 61.7
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 8.0e-41 170.6 133 62.4
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 8.0e-41 170.6 133 60.2
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 8.0e-41 170.6 133 61.7
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 1.0e-40 170.2 133 63.2
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 1.0e-40 170.2 133 62.4
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 1.4e-40 169.9 133 63.2
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 1.4e-40 169.9 132 61.4
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 1.8e-40 169.5 132 60.6
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 1.8e-40 169.5 133 63.2
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 1.8e-40 169.5 133 62.4
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 1.8e-40 169.5 133 61.7
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 1.8e-40 169.5 132 61.4
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 1.8e-40 169.5 133 62.4
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 2.3e-40 169.1 133 60.9
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 3.9e-40 168.3 133 60.2
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 5.2e-40 167.9 133 60.9
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 5.2e-40 167.9 133 60.9
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 5.2e-40 167.9 133 61.7
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 8.8e-40 167.2 133 61.7
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 8.8e-40 167.2 133 61.7
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 8.8e-40 167.2 132 60.6
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 8.8e-40 167.2 134 59.0
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 8.8e-40 167.2 132 59.1
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 1.5e-39 166.4 132 60.6
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 1.5e-39 166.4 133 60.9
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 2.6e-39 165.6 134 58.2
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 4.4e-39 164.9 133 59.4
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 5.7e-39 164.5 134 60.4
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 7.4e-39 164.1 132 60.6
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 7.4e-39 164.1 133 59.4
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 9.7e-39 163.7 132 58.3
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 9.7e-39 163.7 133 60.2
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 9.7e-39 163.7 133 58.6
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 9.7e-39 163.7 131 63.4
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 9.7e-39 163.7 133 59.4
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 1.3e-38 163.3 134 56.7
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 1.3e-38 163.3 133 59.4
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 1.3e-38 163.3 133 61.7
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 1.7e-38 162.9 134 59.0
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 1.7e-38 162.9 133 60.9
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 2.2e-38 162.5 133 58.6
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 2.2e-38 162.5 133 57.9
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 2.8e-38 162.2 133 57.9
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.8e-38 162.2 133 57.9
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 3.7e-38 161.8 133 58.6
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 4.8e-38 161.4 133 57.1
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 4.8e-38 161.4 133 57.9
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 8.2e-38 160.6 134 59.0
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 8.2e-38 160.6 133 59.4
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 8.2e-38 160.6 133 57.9
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 1.1e-37 160.2 133 60.2
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 1.8e-37 159.5 133 57.9
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 2.4e-37 159.1 132 58.3
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 2.4e-37 159.1 132 58.3
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 2.4e-37 159.1 133 56.4
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 2.4e-37 159.1 132 59.1
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 2.4e-37 159.1 133 57.1
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 3.1e-37 158.7 133 58.6
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 3.1e-37 158.7 133 58.6
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 3.1e-37 158.7 135 58.5
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 3.1e-37 158.7 134 57.5
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 4.1e-37 158.3 148 56.1
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 4.1e-37 158.3 133 58.6
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 4.1e-37 158.3 133 58.6
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 5.3e-37 157.9 133 57.9
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.6e-36 156.4 133 56.4
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 3.5e-36 155.2 122 62.3
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 4.5e-36 154.8 133 56.4
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 1.1e-34 150.2 113 70.8
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 3.2e-34 148.7 143 53.8
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 9.4e-34 147.1 122 56.6
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 1.8e-32 142.9 119 58.8
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 7.0e-29 131.0 133 44.4
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 3.8e-27 125.2 161 42.9
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 3.6e-25 118.6 125 47.2
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 7.5e-23 110.9 121 51.2
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.7e-20 102.4 99 49.5
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 3.5e-20 102.1 71 66.2
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 1.1e-18 97.1 57 70.2
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 2.5e-18 95.9 72 62.5
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 6.3e-14 81.3 130 39.2
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 1.0e-11 73.9 60 61.7
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 5.0e-11 71.6 60 55.0
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 1.1e-10 70.5 57 49.1
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 6.8e-08 61.2 34 76.5
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 9.8e-07 57.4 54 50.0


User provided reference genes

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