Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb382470 Zea mays HOM05D001576 ORTHO05D000401 2.5e-113 412.1 211 100.0
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.4e-39 166.4 182 53.3
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 7.2e-28 128.3 182 41.2
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 7.2e-28 128.3 182 41.2
Os12g0543800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 7.4e-25 118.2 182 39.0
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 9.1e-23 111.3 188 36.2
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 9.1e-23 111.3 188 36.2
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 9.1e-23 111.3 198 36.9
SGA_v2.0_scaffold85G26708 Striga asiatica HOM05D001576 ORTHO05D000401 9.1e-23 111.3 198 36.9
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 7.7e-22 108.2 198 35.9
Os09g0351900 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.2e-19 100.9 148 42.6
Os05g0227800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.4e-15 86.7 243 30.5
SGA_v2.0_scaffold19G08588 Striga asiatica HOM05D001576 ORTHO05D000401 2.6e-14 83.2 188 31.9
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.1e-11 72.0 195 31.8
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 8.8e-10 68.2 172 34.9
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.6e-09 66.6 195 30.8
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 3.4e-09 66.2 191 29.3
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 3.4e-09 66.2 191 29.3
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-08 63.9 182 31.3
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-08 63.9 182 31.3
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.2e-08 63.5 182 29.7
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.1e-07 61.2 169 27.8
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-07 60.5 179 26.3
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-07 58.9 189 29.1
CiPaw.09G151300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.0e-07 58.5 186 28.5
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 9.1e-07 58.2 182 28.6
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 1.2e-06 57.8 176 27.3
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.5e-06 55.8 184 27.7


User provided reference genes

Program Settings