Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 1.3e-70 269.6 136 100.0
Os06g0329300 Oryza sativa ssp. japonica HOM05D008446 ORTHO05D010616 1.0e-14 84.0 155 44.5
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 3.0e-11 72.4 92 39.1
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 8.8e-11 70.9 86 39.5
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 1.5e-10 70.1 87 41.4
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 2.6e-10 69.3 97 36.1
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 4.4e-10 68.6 109 40.4
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 5.7e-10 68.2 94 41.5
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 9.7e-10 67.4 89 40.4
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 9.7e-10 67.4 87 40.2
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.7e-09 66.6 93 43.0
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 1.7e-09 66.6 96 38.5
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 2.2e-09 66.2 93 38.7
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 6.3e-09 64.7 93 41.9
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 1.1e-08 63.9 93 38.7
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.1e-08 63.9 108 39.8
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 1.1e-08 63.9 86 37.2
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.4e-08 63.5 87 39.1
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 1.4e-08 63.5 107 41.1
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.8e-08 63.2 87 39.1
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 1.8e-08 63.2 111 36.0
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 2.4e-08 62.8 90 38.9
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 7.0e-08 61.2 91 39.6
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 9.1e-08 60.8 87 36.8
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 1.2e-07 60.5 100 37.0
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 1.2e-07 60.5 108 37.0
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 1.5e-07 60.1 101 34.7
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.5e-07 60.1 86 32.6
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 1.5e-07 60.1 86 34.9
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 2.6e-07 59.3 106 34.9
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.6e-07 59.3 80 41.2
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 2.6e-07 59.3 101 36.6
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 2.6e-07 59.3 93 36.6
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 3.4e-07 58.9 108 37.0
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 4.5e-07 58.5 87 33.3
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 4.5e-07 58.5 87 37.9
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 4.5e-07 58.5 106 33.0
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 4.5e-07 58.5 97 38.1
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 5.9e-07 58.2 87 36.8
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 5.9e-07 58.2 101 36.6
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 7.7e-07 57.8 85 32.9
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 7.7e-07 57.8 87 35.6
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.0e-06 57.4 81 40.7
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.0e-06 57.4 83 39.8
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 1.3e-06 57.0 92 38.0
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 1.7e-06 56.6 111 36.9
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 1.7e-06 56.6 97 34.0
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 2.9e-06 55.8 96 39.6
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 2.9e-06 55.8 93 41.9


User provided reference genes

Program Settings