Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 4.1e-148 528.1 278 100.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 6.0e-99 364.8 279 73.8
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 5.3e-79 298.5 207 73.9
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.3e-77 293.9 243 66.7
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 4.6e-75 285.4 207 70.0
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.6e-75 285.4 271 58.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.0e-74 284.3 207 69.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 3.9e-74 282.3 201 74.1
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.1e-74 282.0 247 64.4
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.1e-74 282.0 218 69.3
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 8.7e-74 281.2 207 69.6
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.5e-73 280.4 207 69.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.9e-73 280.0 207 69.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.3e-73 279.3 206 68.4
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.3e-73 278.9 207 67.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.3e-73 278.9 204 69.6
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 7.4e-73 278.1 193 74.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 6.3e-72 275.0 218 64.7
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 8.2e-72 274.6 204 68.6
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 8.2e-72 274.6 201 72.6
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-71 274.2 204 68.6
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.1e-71 274.2 244 60.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.1e-71 274.2 238 62.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.8e-71 273.5 244 60.2
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.4e-71 273.1 207 67.1
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 2.4e-71 273.1 207 69.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.4e-71 273.1 206 68.9
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 4.1e-71 272.3 202 68.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.9e-71 271.6 277 57.4
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 6.9e-71 271.6 207 69.1
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 9.0e-71 271.2 248 59.3
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.2e-70 270.8 215 67.9
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.2e-70 270.8 206 67.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.2e-70 270.8 283 55.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.5e-70 270.4 206 67.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.0e-70 270.0 207 67.1
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.6e-70 269.6 244 59.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.6e-70 269.6 248 58.9
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.6e-70 269.6 207 67.1
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.4e-70 269.2 207 67.1
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.4e-70 269.2 258 57.8
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.5e-70 268.9 216 66.2
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.5e-70 268.9 202 70.3
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.0e-69 267.7 225 62.7
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.1e-68 264.2 207 66.2
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.9e-68 263.5 287 54.7
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.9e-68 263.5 267 56.2
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 7.2e-68 261.5 231 61.9
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 9.4e-68 261.2 207 64.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.6e-67 260.4 242 57.9
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.6e-67 259.2 270 55.9
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.0e-66 257.7 224 60.7
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.9e-66 255.8 243 57.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.5e-65 253.8 228 60.1
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 7.4e-65 251.5 207 62.8
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 9.7e-65 251.1 207 61.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.8e-64 249.6 265 53.6
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.8e-64 248.8 257 54.1
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 2.4e-63 246.5 218 58.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.1e-63 245.7 207 63.8
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.1e-63 245.7 207 63.8
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.6e-62 243.0 207 60.4
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.6e-62 243.0 209 58.9
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 3.4e-62 242.7 242 57.0
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 7.7e-62 241.5 206 63.1
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-61 240.7 249 55.8
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.9e-61 239.6 254 54.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.8e-61 239.2 175 68.0
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.0e-61 238.8 244 54.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.2e-60 235.0 215 60.5
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 4.7e-59 232.3 189 64.6
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.7e-59 232.3 170 72.9
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.1e-59 231.9 170 72.4
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 7.9e-59 231.5 207 59.4
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.4e-58 230.7 167 72.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 3.0e-58 229.6 203 58.1
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.9e-58 229.2 238 55.9
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-57 227.6 207 58.9
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.0e-57 226.9 207 58.9
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.6e-57 226.5 281 48.8
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-56 224.2 282 49.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.2e-56 223.4 207 59.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.8e-56 223.0 207 58.9
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 6.3e-56 221.9 207 59.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 6.3e-56 221.9 182 65.4
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.4e-55 219.9 162 70.4
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.4e-55 219.9 263 49.8
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.1e-55 219.5 279 48.7
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-54 217.6 279 48.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-54 217.6 240 54.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 3.8e-53 212.6 204 58.8
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.1e-51 206.8 221 54.3
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.5e-49 200.7 170 61.8
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.4e-47 194.1 136 72.8
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.4e-47 194.1 228 50.9
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 7.0e-47 191.8 165 63.6
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.0e-45 188.0 203 49.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.9e-44 183.7 128 74.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 8.0e-43 178.3 134 67.2
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 2.6e-41 173.3 234 47.9
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.4e-41 172.6 189 55.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.8e-40 169.9 179 57.0
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.8e-39 167.2 212 50.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.3e-39 165.6 143 58.0
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 7.0e-39 165.2 181 49.7
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 9.8e-33 144.8 181 50.3
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 6.3e-32 142.1 101 72.3
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.8e-31 140.6 155 53.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.6e-30 137.5 116 57.8
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.7e-30 136.7 236 41.5
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 6.1e-27 125.6 95 67.4
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 5.7e-25 119.0 191 42.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 3.2e-23 113.2 80 73.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 3.5e-22 109.8 254 33.1
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.8e-22 108.6 178 36.5
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.0e-18 98.2 53 96.2
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.1e-18 96.7 193 32.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 5.8e-17 92.4 62 71.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.9e-16 90.1 69 73.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 3.3e-12 76.6 66 60.6


User provided reference genes

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