Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb375960 Zea mays HOM05D009723 ORTHO05D014671 2.2e-168 595.5 297 100.0
Zm00001eb376010 Zea mays HOM05D009723 ORTHO05D014671 1.3e-62 244.2 305 49.5
Zm00001eb375550 Zea mays HOM05D009723 ORTHO05D014671 3.3e-47 193.0 303 44.6
Zm00001eb373770 Zea mays HOM05D009723 ORTHO05D014671 1.6e-44 184.1 306 42.8
Zm00001eb172310 Zea mays HOM05D009723 ORTHO05D014671 4.7e-41 172.6 299 42.5
Zm00001eb271330 Zea mays HOM05D009723 ORTHO05D014671 3.0e-40 169.9 294 40.1
Zm00001eb271340 Zea mays HOM05D009723 ORTHO05D014671 4.5e-36 156.0 280 38.9
Zm00001eb271360 Zea mays HOM05D009723 ORTHO05D014671 2.9e-35 153.3 280 38.6
Zm00001eb271380 Zea mays HOM05D009723 ORTHO05D014671 8.5e-35 151.8 280 38.6
Zm00001eb172340 Zea mays HOM05D009723 ORTHO05D014671 5.5e-34 149.1 312 37.5
Os06g0161100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 8.0e-33 145.2 305 37.7
Os06g0161800 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 8.0e-33 145.2 304 36.5
Os06g0162100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 7.5e-31 138.7 291 38.5
Os06g0161900 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 4.8e-30 136.0 306 35.0
Os05g0115500 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 1.2e-28 131.3 289 37.7
Zm00001eb355600 Zea mays HOM05D009723 ORTHO05D037178 2.7e-28 130.2 296 35.1
Os05g0345700 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 2.3e-27 127.1 310 33.9
Zm00001eb055580 Zea mays HOM05D009723 ORTHO05D445506 1.5e-23 114.4 314 32.5
Zm00001eb376060 Zea mays HOM05D009723 ORTHO05D444291 2.9e-19 100.1 174 42.0
Zm00001eb376070 Zea mays HOM05D009723 ORTHO05D446400 3.6e-17 93.2 174 38.5
Os08g0164300 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D300131 2.6e-15 87.0 307 32.6
Zm00001eb376090 Zea mays HOM05D009723 ORTHO05D445930 2.4e-13 80.5 97 47.4
CANSAT01G1031 Cannabis sativa HOM05D001102 ORTHO05D001018 2.5e-10 70.5 315 28.6
Zm00001eb033370 Zea mays HOM05D009723 ORTHO05D445769 7.3e-10 68.9 71 54.9
FAN17G2651 Fragaria x ananassa HOM05D001102 ORTHO05D001018 4.7e-09 66.2 317 27.1
FAN22G2405 Fragaria x ananassa HOM05D001102 ORTHO05D001018 8.0e-09 65.5 314 26.8
Lj3A1043T83 Lonicera japonica HOM05D001102 ORTHO05D001018 1.1e-08 65.1 148 31.8
arahy.Tifrunner.gnm1.ann1.E9ALLF Arachis hypogaea HOM05D001102 ORTHO05D001018 1.8e-08 64.3 149 32.9
ATR0322G048 Amborella trichopoda HOM05D001102 ORTHO05D001018 4.0e-08 63.2 296 27.7
FvH4_4g35630 Fragaria vesca HOM05D001102 ORTHO05D001018 4.0e-08 63.2 314 26.4
Os08g0164000 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D298143 4.0e-08 63.2 169 32.0
FAN12G3111 Fragaria x ananassa HOM05D001102 ORTHO05D001018 5.2e-08 62.8 314 26.4
CANSAT01G2705 Cannabis sativa HOM05D001102 ORTHO05D001018 6.8e-08 62.4 313 26.8
SMO134G0040 Selaginella moellendorffii HOM05D001102 ORTHO05D001018 6.8e-08 62.4 287 27.2
THA.LOC104808016 Tarenaya hassleriana HOM05D001102 ORTHO05D001018 1.2e-07 61.6 149 34.2
vmacro01223 Vaccinium macrocarpon HOM05D001102 ORTHO05D001018 1.2e-07 61.6 313 25.6
Cfa009063 Carpinus fangiana HOM05D001102 ORTHO05D001018 2.0e-07 60.8 149 32.9
AL5G18260 Arabidopsis lyrata HOM05D001102 ORTHO05D001018 5.8e-07 59.3 171 32.7
arahy.Tifrunner.gnm1.ann1.ZLY334 Arachis hypogaea HOM05D001102 ORTHO05D001018 7.5e-07 58.9 156 31.4
VMungo1215G1462 Vigna mungo HOM05D001102 ORTHO05D001018 7.5e-07 58.9 162 32.7
arahy.Tifrunner.gnm1.ann1.CZ9TB2 Arachis hypogaea HOM05D001102 ORTHO05D001018 1.3e-06 58.2 155 29.7
Carub.0005s0717 Capsella rubella HOM05D001102 ORTHO05D001018 1.3e-06 58.2 171 32.7
BraA07t31206Z Brassica rapa HOM05D001102 ORTHO05D001018 1.7e-06 57.8 147 32.0
Lalb_Chr05g0217511 Lupinus albus HOM05D001102 ORTHO05D001018 2.2e-06 57.4 141 29.1
Nitab4.5_0001334g0090 Nicotiana tabacum HOM05D001102 ORTHO05D001018 2.9e-06 57.0 208 27.9
Phvul.002G080800 Phaseolus vulgaris HOM05D001102 ORTHO05D001018 2.9e-06 57.0 155 32.3
unitig_22.g6918 Utricularia gibba HOM05D001102 ORTHO05D001018 2.9e-06 57.0 280 28.2
EL10Ac2g02924 Beta vulgaris HOM05D001102 ORTHO05D027003 4.9e-06 56.2 147 30.6
Lalb_Chr16g0382721 Lupinus albus HOM05D001102 ORTHO05D001018 8.3e-06 55.5 141 31.9


User provided reference genes

Program Settings