Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb373070 Zea mays HOM05D000923 ORTHO05D000720 2.8e-60 235.3 144 100.0
Zm00001eb069370 Zea mays HOM05D000923 ORTHO05D000720 4.6e-18 95.1 44 97.7
Zm00001eb215500 Zea mays HOM05D000923 ORTHO05D000720 5.6e-16 88.2 44 93.2
Zm00001eb151260 Zea mays HOM05D000923 ORTHO05D000720 7.3e-16 87.8 43 93.0
Zm00001eb216810 Zea mays HOM05D000923 ORTHO05D000720 7.3e-16 87.8 43 93.0
Zm00001eb054170 Zea mays HOM05D000923 ORTHO05D000720 2.8e-15 85.9 43 88.4
Zm00001eb007080 Zea mays HOM05D000923 ORTHO05D000720 4.8e-15 85.1 43 90.7
Os03g0701700 Oryza sativa ssp. japonica HOM05D000923 ORTHO05D000720 2.4e-11 72.8 43 74.4
TWI14G0514 Tripterygium wilfordii HOM05D000923 ORTHO05D000720 2.3e-09 66.2 43 67.4
Potri.002G201500 Populus trichocarpa HOM05D000923 ORTHO05D000720 5.1e-09 65.1 43 67.4
TWI59G0732 Tripterygium wilfordii HOM05D000923 ORTHO05D000720 6.7e-09 64.7 43 65.1
MBI18_g25088_MAGBIO Magnolia biondii HOM05D000923 ORTHO05D000720 8.7e-09 64.3 43 67.4
Eucgr.K03513 Eucalyptus grandis HOM05D000923 ORTHO05D000720 1.5e-08 63.5 43 60.5
MD03G1292200 Malus domestica HOM05D000923 ORTHO05D000720 2.5e-08 62.8 43 62.8
Prupe.8G265200 Prunus persica HOM05D000923 ORTHO05D000720 4.3e-08 62.0 43 60.5
PGR044G0741 Punica granatum HOM05D000923 ORTHO05D000720 4.3e-08 62.0 58 50.0
MD06G1001100 Malus domestica HOM05D000923 ORTHO05D000720 5.6e-08 61.6 43 60.5
MD11G1306200 Malus domestica HOM05D000923 ORTHO05D000720 5.6e-08 61.6 43 60.5
Duzib133G0591 Durio zibethinus HOM05D000923 ORTHO05D000720 7.4e-08 61.2 43 62.8
Cpa.g.sc151.32 Carica papaya HOM05D000923 ORTHO05D000720 9.6e-08 60.8 43 60.5
CiPaw.07G112400 Carya illinoinensis HOM05D000923 ORTHO05D000720 9.6e-08 60.8 57 50.9
Ca_09193_v3 Cicer arietinum L. HOM05D000923 ORTHO05D000720 1.3e-07 60.5 43 62.8
Thecc.01G306100 Theobroma cacao HOM05D000923 ORTHO05D000720 1.3e-07 60.5 43 62.8
Medtr7g109150 Medicago truncatula HOM05D000923 ORTHO05D000720 1.6e-07 60.1 43 62.8
RcHm_v2.0_Chr6g0294491 Rosa chinensis HOM05D000923 ORTHO05D000720 1.6e-07 60.1 43 58.1
Zm00001eb364170 Zea mays HOM05D005447 ORTHO05D006730 1.6e-07 60.1 32 93.8
arahy.Tifrunner.gnm1.ann1.X6L8L6 Arachis hypogaea HOM05D000923 ORTHO05D000720 2.1e-07 59.7 43 60.5
CSS0011184 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 2.1e-07 59.7 43 60.5
CSS0020972 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 2.1e-07 59.7 43 60.5
Psat5g187920 Pisum sativum HOM05D000923 ORTHO05D000720 2.1e-07 59.7 43 60.5
Duzib138G1057 Durio zibethinus HOM05D000923 ORTHO05D000720 2.8e-07 59.3 43 62.8
HanXRQChr06g0167711 Helianthus annuus HOM05D000923 ORTHO05D000720 2.8e-07 59.3 43 58.1
arahy.Tifrunner.gnm1.ann1.QCZR2J Arachis hypogaea HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 60.5
COL.COLO4_23303 Corchorus olitorius HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 58.1
Duzib187G2006 Durio zibethinus HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 62.8
Phvul.001G210200 Phaseolus vulgaris HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 60.5
Sabra02G0157500 Salix brachista HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 60.5
VMungo1383G1430 Vigna mungo HOM05D000923 ORTHO05D000720 3.7e-07 58.9 43 60.5
Glyma.03G216700 Glycine max HOM05D000923 ORTHO05D000720 4.8e-07 58.5 43 60.5
Gohir.D12G132000 Gossypium hirsutum HOM05D000923 ORTHO05D000720 4.8e-07 58.5 43 60.5
Gorai.008G143100 Gossypium raimondii HOM05D000923 ORTHO05D000720 4.8e-07 58.5 43 60.5
Hund19949 Selenicereus undatus HOM05D000923 ORTHO05D000720 4.8e-07 58.5 43 62.8
Peaxi162Scf00001g34002 Petunia axillaris HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 60.5
THA.LOC104802182 Tarenaya hassleriana HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 55.8
THA.LOC104817476 Tarenaya hassleriana HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 55.8
THA.LOC104827701 Tarenaya hassleriana HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 55.8
THA.LOC104827702 Tarenaya hassleriana HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 55.8
TPR.G9631 Trifolium pratense HOM05D000923 ORTHO05D000720 6.2e-07 58.2 43 62.8
AUR62028548 Chenopodium quinoa HOM05D000923 ORTHO05D000720 1.1e-06 57.4 43 60.5
AUR62033500 Chenopodium quinoa HOM05D000923 ORTHO05D000720 1.1e-06 57.4 43 60.5
Glyma.19G213300 Glycine max HOM05D000923 ORTHO05D000720 1.1e-06 57.4 43 58.1
MBI19_g08247_MAGBIO Magnolia biondii HOM05D000923 ORTHO05D000720 1.1e-06 57.4 43 58.1
Aqoxy3G00627 Aquilegia oxysepala HOM05D000923 ORTHO05D000720 1.4e-06 57.0 43 55.8
ECA236G1712 Erigeron canadensis HOM05D000923 ORTHO05D000720 1.4e-06 57.0 43 53.5
Lsat_1_v5_gn_8_164760 Lactuca sativa HOM05D000923 ORTHO05D000720 1.4e-06 57.0 43 55.8
TAR636G2421 Trochodendron aralioides HOM05D000923 ORTHO05D000720 1.4e-06 57.0 43 60.5
Zm00001eb282800 Zea mays HOM05D000923 ORTHO05D000720 1.4e-06 57.0 58 46.6
Aqoxy2G02871 Aquilegia oxysepala HOM05D000923 ORTHO05D000720 1.8e-06 56.6 43 53.5
Dinv44683 Davidia involucrata HOM05D000923 ORTHO05D000720 1.8e-06 56.6 43 62.8
Hma1.2p1_0494F.1_g165480 Hydrangea macrophylla HOM05D000923 ORTHO05D000720 1.8e-06 56.6 57 47.4
Manes.01G222900 Manihot esculenta HOM05D000923 ORTHO05D000720 1.8e-06 56.6 43 58.1
Nitab4.5_0000803g0010 Nicotiana tabacum HOM05D000923 ORTHO05D000720 1.8e-06 56.6 43 58.1
C04p00310 Brassica napus HOM05D000923 ORTHO05D000720 2.4e-06 56.2 43 53.5
BolC4t21674H Brassica oleracea HOM05D000923 ORTHO05D000720 2.4e-06 56.2 43 53.5
CANSAT35G0431 Cannabis sativa HOM05D000923 ORTHO05D000720 2.4e-06 56.2 44 61.4
FAN15G2592 Fragaria x ananassa HOM05D000923 ORTHO05D000720 2.4e-06 56.2 44 56.8
Lj1g0014358 Lotus japonicus HOM05D000923 ORTHO05D000720 2.4e-06 56.2 43 58.1
GSVIVG01028053001 Vitis vinifera HOM05D000923 ORTHO05D000720 2.4e-06 56.2 43 55.8
FvH4_2g26120 Fragaria vesca HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
FAN20G3030 Fragaria x ananassa HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
FAN24G0228 Fragaria x ananassa HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
FAN27G0671 Fragaria x ananassa HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
Nitab4.5_0000116g0290 Nicotiana tabacum HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
QL12p027757 Quercus lobata HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 55.8
Solyc09g075440.4 Solanum lycopersicum HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 58.1
Sopen09g030220 Solanum pennellii HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 58.1
PGSC0003DMG400031819 Solanum tuberosum HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 58.1
HPP92_016955 Vanilla planifolia HOM05D000923 ORTHO05D000720 3.1e-06 55.8 43 58.1
Aa31LG1G28840 Aethionema arabicum HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 53.5
CARHR142920 Cardamine hirsuta HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 53.5
Thhalv10001362m.g Eutrema salsugineum HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 53.5
Gohir.A12G128400 Gossypium hirsutum HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 58.1
Lalb_Chr04g0259871 Lupinus albus HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 60.5
Sp4g29460 Schrenkiella parvula HOM05D000923 ORTHO05D000720 4.0e-06 55.5 43 53.5
A05p00400 Brassica napus HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 53.5
BraA05t19038Z Brassica rapa HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 53.5
CDE01G0739 Ceratophyllum demersum HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 55.8
Duzib213G0205 Durio zibethinus HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 60.5
Duzib268G0841 Durio zibethinus HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 60.5
FAN19G0146 Fragaria x ananassa HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 62.8
Gohir.A01G041500 Gossypium hirsutum HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 60.5
Gohir.D01G028800 Gossypium hirsutum HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 60.5
Gorai.002G038300 Gossypium raimondii HOM05D000923 ORTHO05D000720 5.3e-06 55.1 43 60.5
Oeu006449.1 Olea europaea HOM05D000923 ORTHO05D000720 5.3e-06 55.1 57 49.1
Ah.08g210630 Amaranthus hybridus HOM05D000923 ORTHO05D000720 6.9e-06 54.7 43 58.1
Eucgr.J02086 Eucalyptus grandis HOM05D000923 ORTHO05D000720 6.9e-06 54.7 43 58.1
TWI38G0669 Tripterygium wilfordii HOM05D000923 ORTHO05D000720 6.9e-06 54.7 43 58.1
AL4G38910 Arabidopsis lyrata HOM05D000923 ORTHO05D000720 9.0e-06 54.3 43 53.5
AT2G40940 Arabidopsis thaliana HOM05D000923 ORTHO05D000720 9.0e-06 54.3 43 53.5
EL10Ac7g16933 Beta vulgaris HOM05D000923 ORTHO05D000720 9.0e-06 54.3 43 58.1
Carub.0004s2325 Capsella rubella HOM05D000923 ORTHO05D000720 9.0e-06 54.3 43 53.5
Cpa.g.sc84.52 Carica papaya HOM05D000923 ORTHO05D000720 9.0e-06 54.3 43 60.5


User provided reference genes

Program Settings