Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb371330 Zea mays HOM05D005922 ORTHO05D006934 9.6e-56 219.9 112 100.0
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 3.0e-17 92.0 98 59.2
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 3.8e-12 75.1 87 48.3
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 4.0e-09 65.1 41 68.3
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 6.8e-09 64.3 88 35.2
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 6.8e-09 64.3 88 37.5
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.5e-08 63.2 88 38.6
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.6e-08 62.4 85 37.6
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 3.4e-08 62.0 86 36.0
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 4.4e-08 61.6 88 37.5
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 7.5e-08 60.8 41 58.5
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 7.5e-08 60.8 88 35.2
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 7.5e-08 60.8 88 35.2
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 7.5e-08 60.8 41 58.5
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 7.5e-08 60.8 41 61.0
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 7.5e-08 60.8 41 61.0
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 7.5e-08 60.8 41 56.1
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 9.8e-08 60.5 85 36.5
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 9.8e-08 60.5 85 36.5
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 9.8e-08 60.5 85 36.5
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.3e-07 60.1 41 56.1
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.3e-07 60.1 41 56.1
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 1.7e-07 59.7 84 35.7
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.7e-07 59.7 85 35.3
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 2.2e-07 59.3 41 53.7
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-07 58.9 84 33.3
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 2.8e-07 58.9 86 34.9
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 2.8e-07 58.9 85 32.9
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 2.8e-07 58.9 41 53.7
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 3.7e-07 58.5 41 53.7
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 3.7e-07 58.5 41 51.2
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 3.7e-07 58.5 85 36.5
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 4.8e-07 58.2 41 53.7
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 4.8e-07 58.2 45 48.9
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 4.8e-07 58.2 41 48.8
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 6.3e-07 57.8 41 51.2
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 6.3e-07 57.8 41 51.2
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 6.3e-07 57.8 85 32.9
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 6.3e-07 57.8 41 51.2
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 6.3e-07 57.8 41 51.2
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 8.3e-07 57.4 41 53.7
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 8.3e-07 57.4 85 34.1
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 8.3e-07 57.4 56 44.6
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.1e-06 57.0 41 51.2
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 1.1e-06 57.0 85 35.3
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.1e-06 57.0 41 51.2
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.4e-06 56.6 85 34.1
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 1.4e-06 56.6 41 53.7
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.8e-06 56.2 85 34.1
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.8e-06 56.2 41 48.8
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.4e-06 55.8 41 53.7
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 2.4e-06 55.8 41 53.7
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 2.4e-06 55.8 85 34.1
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.4e-06 55.8 41 51.2
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 3.1e-06 55.5 41 48.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 3.1e-06 55.5 84 33.3
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 4.1e-06 55.1 85 32.9
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 4.1e-06 55.1 85 32.9
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 4.1e-06 55.1 41 51.2
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 5.4e-06 54.7 85 32.9
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 7.0e-06 54.3 41 53.7
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 7.0e-06 54.3 41 56.1
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 7.0e-06 54.3 41 53.7
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 9.1e-06 53.9 41 43.9


User provided reference genes

Program Settings