Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb370970 Zea mays HOM05D001373 ORTHO05D034821 2.1e-35 151.8 73 100.0
Zm00001eb196970 Zea mays HOM05D001373 ORTHO05D001330 1.2e-33 146.0 73 95.9
Zm00001eb097590 Zea mays HOM05D001373 ORTHO05D034821 3.4e-33 144.4 73 95.9
Os11g0151500 Oryza sativa ssp. japonica HOM05D001373 ORTHO05D001330 8.3e-16 86.7 68 64.7
Cc00_g18830 Coffea canephora HOM05D001373 ORTHO05D034821 3.4e-09 64.7 67 47.8
Cc02_g09870 Coffea canephora HOM05D001373 ORTHO05D001330 3.4e-09 64.7 67 47.8
QL04p044735 Quercus lobata HOM05D001373 ORTHO05D001330 1.3e-08 62.8 68 48.5
Aqoxy4G02811 Aquilegia oxysepala HOM05D001373 ORTHO05D001330 1.7e-08 62.4 67 50.7
Oeu061779.1 Olea europaea HOM05D001373 ORTHO05D001330 2.9e-08 61.6 67 47.8
QL04p044744 Quercus lobata HOM05D001373 ORTHO05D001330 3.7e-08 61.2 68 45.6
FvH4_7g05740 Fragaria vesca HOM05D001373 ORTHO05D001330 4.9e-08 60.8 66 48.5
FAN01G2854 Fragaria x ananassa HOM05D001373 ORTHO05D001330 4.9e-08 60.8 66 48.5
FAN10G3078 Fragaria x ananassa HOM05D001373 ORTHO05D001330 4.9e-08 60.8 66 48.5
Potri.010G237300 Populus trichocarpa HOM05D001373 ORTHO05D001330 6.4e-08 60.5 68 47.1
Thecc.10G107800 Theobroma cacao HOM05D001373 ORTHO05D001330 6.4e-08 60.5 42 66.7
Cc02_g09850 Coffea canephora HOM05D001373 ORTHO05D001330 8.3e-08 60.1 67 44.8
FAN06G0236 Fragaria x ananassa HOM05D001373 ORTHO05D001330 1.1e-07 59.7 66 47.0
PGR142G2723 Punica granatum HOM05D001373 ORTHO05D001330 1.1e-07 59.7 67 46.3
CANSAT56G3177 Cannabis sativa HOM05D001373 ORTHO05D001330 1.4e-07 59.3 66 45.5
QL04p044773 Quercus lobata HOM05D001373 ORTHO05D001330 1.4e-07 59.3 68 44.1
Atru.chr12.1004 Acer truncatum HOM05D001373 ORTHO05D001330 1.9e-07 58.9 68 45.6
Sopen11g003060 Solanum pennellii HOM05D001373 ORTHO05D001330 1.9e-07 58.9 67 46.3
VMungo0720G0665 Vigna mungo HOM05D001373 ORTHO05D001330 1.9e-07 58.9 66 47.0
CSS0015733 Camellia sinensis var. sinensis HOM05D001373 ORTHO05D001330 2.4e-07 58.5 68 45.6
Eucgr.G02698 Eucalyptus grandis HOM05D001373 ORTHO05D001330 2.4e-07 58.5 57 49.1
SalBow6G4659 Salvia bowleyana HOM05D001373 ORTHO05D001330 2.4e-07 58.5 67 43.3
PSO339G2300 Papaver somniferum HOM05D001373 ORTHO05D001330 3.2e-07 58.2 67 46.3
PSO384G1565 Papaver somniferum HOM05D001373 ORTHO05D001330 3.2e-07 58.2 67 46.3
Cpa.g.sc183.3 Carica papaya HOM05D001373 ORTHO05D001330 4.1e-07 57.8 66 47.0
Cc00_g18820 Coffea canephora HOM05D001373 ORTHO05D001330 4.1e-07 57.8 67 46.3
Cc00_g18840 Coffea canephora HOM05D001373 ORTHO05D001330 4.1e-07 57.8 67 46.3
Nn6g34953 Nelumbo nucifera HOM05D001373 ORTHO05D001330 4.1e-07 57.8 67 41.8
Potri.008G022100 Populus trichocarpa HOM05D001373 ORTHO05D001330 4.1e-07 57.8 44 61.4
Sabra08G0015000 Salix brachista HOM05D001373 ORTHO05D001330 4.1e-07 57.8 44 61.4
CDE06G1486 Ceratophyllum demersum HOM05D001373 ORTHO05D001330 5.4e-07 57.4 67 52.2
Atru.chr12.1002 Acer truncatum HOM05D001373 ORTHO05D001330 7.0e-07 57.0 68 42.6
Hma1.2p1_0356F.1_g133990 Hydrangea macrophylla HOM05D001373 ORTHO05D001330 7.0e-07 57.0 68 44.1
Eucgr.J00999 Eucalyptus grandis HOM05D001373 ORTHO05D001330 9.2e-07 56.6 70 41.4
Rhsim09G0143000 Rhododendron simsii HOM05D001373 ORTHO05D001330 9.2e-07 56.6 57 50.9
Sabra10G0185800 Salix brachista HOM05D001373 ORTHO05D005988 9.2e-07 56.6 68 45.6
CiPaw.14G032600 Carya illinoinensis HOM05D001373 ORTHO05D001330 1.2e-06 56.2 66 45.5
Migut.F00904 Erythranthe guttata HOM05D001373 ORTHO05D001330 1.2e-06 56.2 40 62.5
Glyma.10G203700 Glycine max HOM05D001373 ORTHO05D001330 1.2e-06 56.2 66 47.0
Phvul.007G103300 Phaseolus vulgaris HOM05D001373 ORTHO05D001330 1.2e-06 56.2 41 61.0
Ciclev10031562m.g Citrus clementina HOM05D001373 ORTHO05D001330 1.6e-06 55.8 40 65.0
Eucgr.J00997 Eucalyptus grandis HOM05D001373 ORTHO05D001330 1.6e-06 55.8 66 43.9
Lalb_Chr06g0170201 Lupinus albus HOM05D001373 ORTHO05D001330 1.6e-06 55.8 41 61.0
PGR044G1873 Punica granatum HOM05D001373 ORTHO05D001330 1.6e-06 55.8 66 45.5
RcHm_v2.0_Chr1g0332771 Rosa chinensis HOM05D001373 ORTHO05D001330 1.6e-06 55.8 41 63.4
arahy.Tifrunner.gnm1.ann1.DMB65R Arachis hypogaea HOM05D001373 ORTHO05D001330 2.0e-06 55.5 41 61.0
arahy.Tifrunner.gnm1.ann1.MWJV02 Arachis hypogaea HOM05D001373 ORTHO05D001330 2.0e-06 55.5 41 61.0
Medtr1g092870 Medicago truncatula HOM05D001373 ORTHO05D001330 2.0e-06 55.5 66 48.5
Peaxi162Scf00173g00824 Petunia axillaris HOM05D001373 ORTHO05D001330 2.7e-06 55.1 57 49.1
COL.COLO4_37500 Corchorus olitorius HOM05D001373 ORTHO05D001330 3.5e-06 54.7 39 61.5
FAN03G2160 Fragaria x ananassa HOM05D001373 ORTHO05D001330 3.5e-06 54.7 65 46.2
TWI63G1122 Tripterygium wilfordii HOM05D001373 ORTHO05D001330 3.5e-06 54.7 41 65.9
CDE08G1249 Ceratophyllum demersum HOM05D001373 ORTHO05D001330 4.6e-06 54.3 67 52.2
Psat6g177600 Pisum sativum HOM05D001373 ORTHO05D001330 6.0e-06 53.9 41 63.4
Hund06776 Selenicereus undatus HOM05D001373 ORTHO05D001330 6.0e-06 53.9 67 38.8
TPR.G18692 Trifolium pratense HOM05D001373 ORTHO05D001330 6.0e-06 53.9 41 63.4
CiPaw.13G038300 Carya illinoinensis HOM05D001373 ORTHO05D001330 7.8e-06 53.5 66 40.9
Medtr1g092880 Medicago truncatula HOM05D001373 ORTHO05D001330 7.8e-06 53.5 41 61.0
Nitab4.5_0001437g0220 Nicotiana tabacum HOM05D001373 ORTHO05D001330 7.8e-06 53.5 67 46.3


User provided reference genes

Program Settings