Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb367030 Zea mays HOM05D006130 ORTHO05D007491 2.9e-63 245.0 118 100.0
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 9.6e-14 80.5 42 90.5
Zm00001eb303300 Zea mays HOM05D200348 ORTHO05D444287 1.2e-11 73.6 44 81.8
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 3.4e-11 72.0 42 81.0
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 5.5e-09 64.7 42 66.7
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 9.3e-09 63.9 52 55.8
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 2.7e-08 62.4 63 50.8
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 1.0e-07 60.5 42 66.7
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 1.0e-07 60.5 42 66.7
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 1.3e-07 60.1 63 50.8
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 2.3e-07 59.3 39 69.2
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 3.0e-07 58.9 42 61.9
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 3.9e-07 58.5 42 61.9
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 5.1e-07 58.2 42 64.3
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 5.1e-07 58.2 42 61.9
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 6.7e-07 57.8 42 64.3
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 6.7e-07 57.8 42 64.3
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 6.7e-07 57.8 45 53.3
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 6.7e-07 57.8 42 64.3
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 6.7e-07 57.8 52 50.0
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 8.7e-07 57.4 42 64.3
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 8.7e-07 57.4 42 59.5
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 1.1e-06 57.0 42 61.9
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 1.5e-06 56.6 42 61.9
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.9e-06 56.2 41 61.0
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.9e-06 56.2 41 61.0
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 1.9e-06 56.2 42 59.5
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.5e-06 55.8 41 61.0
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.5e-06 55.8 41 61.0
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 2.5e-06 55.8 42 61.9
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 2.5e-06 55.8 42 59.5
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 2.5e-06 55.8 42 61.9
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 3.3e-06 55.5 42 61.9
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 3.3e-06 55.5 41 61.0
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 3.3e-06 55.5 42 61.9
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 3.3e-06 55.5 42 61.9
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 3.3e-06 55.5 41 58.5
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.1 42 61.9
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 4.3e-06 55.1 42 59.5
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 4.3e-06 55.1 42 59.5
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 5.6e-06 54.7 42 61.9
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 5.6e-06 54.7 42 59.5
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 5.6e-06 54.7 42 59.5
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 5.6e-06 54.7 42 57.1
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 5.6e-06 54.7 42 59.5
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 9.6e-06 53.9 38 60.5
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 9.6e-06 53.9 38 60.5
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 9.6e-06 53.9 42 59.5
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 9.6e-06 53.9 42 57.1


User provided reference genes

Program Settings