Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb363550 Zea mays HOM05D000551 ORTHO05D001750 2.0e-47 192.2 102 100.0
Zm00001eb142330 Zea mays HOM05D000551 ORTHO05D001750 8.0e-25 117.1 102 68.6
Os01g0931600 Oryza sativa ssp. japonica HOM05D000551 ORTHO05D001750 3.0e-16 88.6 103 55.3
EL10Ac5g12779 Beta vulgaris HOM05D000551 ORTHO05D001750 6.2e-09 64.3 74 51.4
Nitab4.5_0001356g0110 Nicotiana tabacum HOM05D000551 ORTHO05D001750 3.1e-08 62.0 71 47.9
Nitab4.5_0011908g0010 Nicotiana tabacum HOM05D000551 ORTHO05D001750 3.1e-08 62.0 71 47.9
GSVIVG01019780001 Vitis vinifera HOM05D000551 ORTHO05D001750 4.0e-08 61.6 69 49.3
COL.COLO4_34434 Corchorus olitorius HOM05D000551 ORTHO05D001750 8.9e-08 60.5 78 48.7
DCAR_006746 Daucus carota HOM05D000551 ORTHO05D001750 1.5e-07 59.7 69 52.2
Hma1.2p1_0377F.1_g139270 Hydrangea macrophylla HOM05D000551 ORTHO05D001750 2.0e-07 59.3 69 53.6
Peaxi162Scf00102g01554 Petunia axillaris HOM05D000551 ORTHO05D001750 2.0e-07 59.3 73 43.8
Peaxi162Scf00119g00313 Petunia axillaris HOM05D000551 ORTHO05D001750 2.6e-07 58.9 71 45.1
Zm00001eb142340 Zea mays HOM05D000551 ORTHO05D001750 2.6e-07 58.9 71 52.1
Gohir.D05G143525 Gossypium hirsutum HOM05D000551 ORTHO05D001750 3.4e-07 58.5 69 46.4
Gohir.D05G143700 Gossypium hirsutum HOM05D000551 ORTHO05D001750 3.4e-07 58.5 69 46.4
EL10Ac5g12778 Beta vulgaris HOM05D000551 ORTHO05D001750 4.4e-07 58.2 94 41.5
AUR62017257 Chenopodium quinoa HOM05D000551 ORTHO05D001750 4.4e-07 58.2 74 48.6
Nn1g01465 Nelumbo nucifera HOM05D000551 ORTHO05D001750 4.4e-07 58.2 69 47.8
Gorai.009G147600 Gossypium raimondii HOM05D000551 ORTHO05D001750 5.8e-07 57.8 69 46.4
Potri.003G125300 Populus trichocarpa HOM05D000551 ORTHO05D001750 7.5e-07 57.4 69 43.5
Sabra03G0088700 Salix brachista HOM05D000551 ORTHO05D001750 7.5e-07 57.4 69 43.5
CAN.G859.15 Capsicum annuum HOM05D000551 ORTHO05D001750 9.8e-07 57.0 71 42.3
MBI19_g32867_MAGBIO Magnolia biondii HOM05D000551 ORTHO05D001750 9.8e-07 57.0 76 44.7
PGSC0003DMG400003046 Solanum tuberosum HOM05D000551 ORTHO05D001750 9.8e-07 57.0 71 42.3
Prupe.5G096600 Prunus persica HOM05D000551 ORTHO05D001750 1.3e-06 56.6 75 48.0
Solyc08g080750.4 Solanum lycopersicum HOM05D000551 ORTHO05D001750 1.3e-06 56.6 71 40.8
Sopen08g029070 Solanum pennellii HOM05D000551 ORTHO05D001750 1.3e-06 56.6 71 40.8
Haze_08880 Corylus avellana HOM05D000551 ORTHO05D001750 1.7e-06 56.2 85 44.7
Peaxi162Scf00102g01537 Petunia axillaris HOM05D000551 ORTHO05D001750 2.2e-06 55.8 69 44.9
CiPaw.11G137900 Carya illinoinensis HOM05D000551 ORTHO05D001750 2.9e-06 55.5 86 45.3
CiPaw.12G094800 Carya illinoinensis HOM05D000551 ORTHO05D001750 2.9e-06 55.5 85 45.9
Nitab4.5_0015173g0010 Nicotiana tabacum HOM05D000551 ORTHO05D001750 2.9e-06 55.5 71 42.3
Prupe.5G096700 Prunus persica HOM05D000551 ORTHO05D001750 2.9e-06 55.5 75 45.3
CSS0010093 Camellia sinensis var. sinensis HOM05D000551 ORTHO05D001750 3.7e-06 55.1 97 37.1
AUR62010612 Chenopodium quinoa HOM05D000551 ORTHO05D001750 3.7e-06 55.1 65 49.2
Gohir.A05G141501 Gossypium hirsutum HOM05D000551 ORTHO05D001750 3.7e-06 55.1 69 44.9
Thecc.03G276000 Theobroma cacao HOM05D000551 ORTHO05D001750 3.7e-06 55.1 81 42.0
DCAR_008407 Daucus carota HOM05D000551 ORTHO05D001750 4.9e-06 54.7 71 47.9
GSVIVG01019781001 Vitis vinifera HOM05D000551 ORTHO05D001750 4.9e-06 54.7 69 46.4
CANSAT21G0805 Cannabis sativa HOM05D000551 ORTHO05D001750 6.4e-06 54.3 71 45.1
Nitab4.5_0003907g0010 Nicotiana tabacum HOM05D000551 ORTHO05D001750 6.4e-06 54.3 73 39.7


User provided reference genes

Program Settings