Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 8.7e-253 876.7 516 100.0
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 5.7e-87 325.9 620 39.2
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 1.0e-30 139.0 568 26.4
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.2e-30 137.9 505 29.9
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.1e-29 135.6 343 32.7
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 5.5e-29 133.3 496 28.0
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.3e-27 128.6 513 29.2
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 6.7e-27 126.3 556 28.8
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 8.7e-27 125.9 503 28.4
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 8.7e-27 125.9 518 27.8
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 1.5e-26 125.2 510 28.2
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 1.5e-26 125.2 507 27.2
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.5e-26 124.4 503 28.2
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 5.7e-26 123.2 515 28.3
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 1.6e-25 121.7 516 27.5
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 6.2e-25 119.8 467 28.1
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.4e-24 118.6 324 29.9
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.4e-24 118.6 485 26.0
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 1.8e-24 118.2 513 26.5
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.1e-24 117.5 324 30.6
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 5.3e-24 116.7 552 25.9
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 5.3e-24 116.7 505 25.5
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 6.9e-24 116.3 314 32.8
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 1.2e-23 115.5 527 27.7
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 2.0e-23 114.8 509 27.1
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 4.5e-23 113.6 350 32.3
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 7.6e-23 112.8 504 25.0
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 7.6e-23 112.8 337 31.5
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 7.6e-23 112.8 326 33.7
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 2.2e-22 111.3 523 28.5
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 2.2e-22 111.3 348 31.6
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 2.9e-22 110.9 343 30.6
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 2.9e-22 110.9 321 34.0
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 5.0e-22 110.2 349 32.1
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 5.0e-22 110.2 347 30.8
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 6.5e-22 109.8 331 32.9
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 1.1e-21 109.0 361 31.9
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 1.4e-21 108.6 494 25.9
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 9.3e-21 105.9 350 30.3
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 1.6e-20 105.1 486 26.5
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 1.6e-20 105.1 491 28.9
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 2.7e-20 104.4 500 25.4
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 4.6e-20 103.6 336 30.7
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 1.0e-19 102.4 342 30.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.0e-19 102.4 496 26.2
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 1.0e-19 102.4 348 31.6
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.3e-19 102.1 573 24.4
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 1.8e-19 101.7 469 24.9
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 2.3e-19 101.3 486 25.9
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 3.9e-19 100.5 337 31.2
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 5.1e-19 100.1 345 29.6
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.5e-18 98.6 500 26.0
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.9e-18 98.2 500 26.6
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 4.3e-18 97.1 514 25.9
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 5.7e-18 96.7 516 26.2
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 7.4e-18 96.3 357 29.4
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 7.4e-18 96.3 346 29.5
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 9.7e-18 95.9 516 27.7
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 9.7e-18 95.9 515 27.2
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.3e-17 95.5 346 29.5
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 2.2e-17 94.7 489 27.0
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 2.8e-17 94.4 352 29.8
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 3.7e-17 94.0 361 29.9
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 6.3e-17 93.2 337 30.0
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 8.2e-17 92.8 328 31.4
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 8.2e-17 92.8 329 31.3
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.1e-16 92.4 492 26.6
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 1.1e-16 92.4 502 25.1
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.4e-16 92.0 490 29.0
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.4e-16 92.0 490 29.0
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 1.8e-16 91.7 379 28.2
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 2.4e-16 91.3 536 24.1
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 2.4e-16 91.3 338 29.6
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 3.1e-16 90.9 388 28.6
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 4.1e-16 90.5 323 30.0
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 4.1e-16 90.5 345 29.6
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 5.3e-16 90.1 342 29.5
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 6.9e-16 89.7 385 28.1
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 2.0e-15 88.2 324 29.6
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 2.6e-15 87.8 331 32.0
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 2.6e-15 87.8 331 32.0
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 2.6e-15 87.8 331 32.0
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 2.6e-15 87.8 366 26.8
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 1.0e-14 85.9 531 24.7
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 2.9e-14 84.3 384 26.8
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 3.8e-14 84.0 321 31.8
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 5.0e-14 83.6 475 25.7
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 5.0e-14 83.6 315 29.5
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 8.5e-14 82.8 321 29.3
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 1.9e-13 81.6 348 29.9
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 1.9e-13 81.6 319 30.4
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 4.2e-13 80.5 348 28.4
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 4.2e-13 80.5 348 28.4
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 7.2e-13 79.7 321 28.0
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.6e-12 78.6 334 27.5
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.7e-12 77.8 478 25.7
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 6.1e-12 76.6 338 27.5
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 7.9e-12 76.3 323 28.5
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 7.9e-12 76.3 331 30.2
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 1.0e-11 75.9 328 29.6
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 1.0e-11 75.9 313 29.7
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 1.0e-11 75.9 344 28.2
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 5.1e-11 73.6 215 29.3
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 6.7e-11 73.2 76 53.9
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 1.1e-10 72.4 128 36.7
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 1.1e-08 65.9 302 28.5
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.1e-08 65.9 239 27.6
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.5e-07 62.0 194 30.9


User provided reference genes

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