Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb352040 Zea mays HOM05D003589 ORTHO05D005170 7.6e-155 550.8 348 100.0
Zm00001eb290650 Zea mays HOM05D003589 ORTHO05D005170 5.9e-115 418.3 350 78.6
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 1.1e-57 228.0 229 57.6
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 8.2e-24 115.5 216 37.5
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 2.4e-23 114.0 216 36.6
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.3e-21 108.2 238 37.0
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.4e-20 104.8 209 35.9
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.6e-19 101.3 217 34.6
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 1.6e-19 101.3 229 37.1
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 2.1e-19 100.9 249 32.9
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 2.1e-19 100.9 215 36.3
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.1e-19 100.9 241 32.0
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 6.1e-19 99.4 220 35.5
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 6.1e-19 99.4 225 33.3
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.4e-18 98.2 220 37.7
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.4e-18 98.2 227 33.0
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.8e-18 97.8 227 33.9
Zm00001eb109700 Zea mays HOM05D001332 ORTHO05D007191 1.8e-18 97.8 82 73.2
Zm00001eb194720 Zea mays HOM05D001332 ORTHO05D007191 1.8e-18 97.8 82 73.2
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 2.3e-18 97.4 217 34.6
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 2.3e-18 97.4 207 38.2
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 5.1e-18 96.3 227 32.6
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 5.1e-18 96.3 219 32.0
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.1e-17 95.1 200 34.0
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 2.0e-17 94.4 217 31.3
Zm00001eb098780 Zea mays HOM05D001332 ORTHO05D007191 2.0e-17 94.4 82 70.7
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 4.3e-17 93.2 213 33.8
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 4.3e-17 93.2 218 33.5
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 7.4e-17 92.4 220 34.5
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.7e-16 90.1 243 30.0
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 4.8e-16 89.7 222 32.4
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 6.3e-16 89.4 218 34.9
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 8.2e-16 89.0 238 33.2
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 8.2e-16 89.0 220 31.4
Zm00001eb073820 Zea mays HOM05D001332 ORTHO05D007191 1.1e-15 88.6 77 72.7
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 1.4e-15 88.2 218 33.5
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 4.1e-15 86.7 251 32.3
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 5.3e-15 86.3 257 30.7
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 5.3e-15 86.3 214 33.2
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 9.1e-15 85.5 186 34.9
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 9.1e-15 85.5 247 32.8
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 9.1e-15 85.5 249 31.3
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.2e-14 85.1 209 32.5
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.5e-14 84.7 150 43.3
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.5e-14 84.7 218 33.5
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 1.5e-14 84.7 232 30.6
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 3.4e-14 83.6 241 30.3
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 3.4e-14 83.6 219 32.4
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 3.4e-14 83.6 216 32.9
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 3.4e-14 83.6 229 26.6
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 5.9e-14 82.8 185 31.9
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.0e-13 82.0 185 30.3
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.0e-13 82.0 189 36.0
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.3e-13 81.6 228 30.3
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 2.2e-13 80.9 186 35.5
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.9e-13 80.5 228 29.8
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.9e-13 80.5 228 29.8
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 3.8e-13 80.1 220 30.9
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 3.8e-13 80.1 245 29.4
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 3.8e-13 80.1 248 32.3
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 6.5e-13 79.3 187 33.2
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 6.5e-13 79.3 218 28.4
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 8.5e-13 79.0 236 32.2
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 8.5e-13 79.0 216 31.0
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.1e-12 78.6 184 26.6
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 3.2e-12 77.0 250 32.4
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 4.2e-12 76.6 227 33.9
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 4.2e-12 76.6 148 37.2
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 5.5e-12 76.3 242 30.2
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 5.5e-12 76.3 209 27.8
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 7.2e-12 75.9 241 28.2
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 9.4e-12 75.5 243 29.6
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 9.4e-12 75.5 249 28.5
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 2.1e-11 74.3 224 30.4
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 3.6e-11 73.6 216 33.8
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 3.6e-11 73.6 215 30.2
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 7.9e-11 72.4 150 39.3
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 1.0e-10 72.0 184 27.7
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.8e-10 71.2 218 31.7
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 1.8e-10 71.2 149 31.5
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 2.3e-10 70.9 223 33.2
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 2.3e-10 70.9 218 31.2
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 3.0e-10 70.5 207 31.9
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 3.9e-10 70.1 146 36.3
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 8.8e-10 68.9 219 32.4
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.5e-09 68.2 208 27.4
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 2.0e-09 67.8 205 30.7
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 2.6e-09 67.4 248 30.6
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 2.6e-09 67.4 253 30.0
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 3.3e-09 67.0 188 33.5
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 7.4e-09 65.9 195 32.3
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.3e-08 65.1 204 31.9
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 1.3e-08 65.1 186 30.6
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 1.3e-08 65.1 135 36.3
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.7e-08 64.7 195 32.8
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.7e-08 64.7 178 27.0
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 2.2e-08 64.3 237 29.5
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 2.2e-08 64.3 237 29.1
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 2.8e-08 63.9 247 28.7
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.7e-08 63.5 210 28.1
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 4.8e-08 63.2 205 30.2
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 6.3e-08 62.8 249 26.5
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 6.3e-08 62.8 244 25.4
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 8.2e-08 62.4 207 26.1
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 1.8e-07 61.2 183 27.9
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 1.8e-07 61.2 109 38.5
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.1e-07 60.5 214 24.8
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 3.1e-07 60.5 217 28.1
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 4.1e-07 60.1 126 34.9
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 7.0e-07 59.3 225 29.3
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 9.1e-07 58.9 210 28.6
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 1.2e-06 58.5 245 27.8
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.0e-06 57.8 214 24.3
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 2.0e-06 57.8 122 36.9
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 3.5e-06 57.0 186 25.8


User provided reference genes

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