Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 4.9e-255 884.4 607 100.0
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 3.5e-144 516.2 589 72.8
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.1e-76 292.0 578 50.7
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 3.3e-73 280.4 618 33.8
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 5.5e-73 279.6 587 45.1
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.5e-70 271.6 582 43.0
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 9.8e-70 268.9 574 41.1
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.2e-69 267.7 608 31.6
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 3.2e-68 263.8 574 44.8
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 3.2e-68 263.8 574 37.8
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 9.2e-68 262.3 575 44.7
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.0e-67 261.2 588 33.5
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.5e-67 260.4 578 52.2
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 4.6e-67 260.0 573 46.2
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.6e-67 260.0 578 48.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 5.9e-67 259.6 574 50.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 7.8e-67 259.2 574 38.0
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 1.0e-66 258.8 573 40.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.7e-66 258.1 580 45.7
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.7e-66 258.1 600 42.5
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 3.9e-66 256.9 574 47.9
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.1e-65 255.4 601 39.1
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.3e-65 253.4 620 33.5
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 1.6e-64 251.5 605 41.7
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.1e-64 251.1 615 38.5
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 2.1e-64 251.1 581 42.0
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 2.8e-64 250.8 577 45.2
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 4.7e-64 250.0 583 44.3
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.7e-64 250.0 591 35.2
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.4e-63 248.4 599 49.6
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.4e-63 248.4 590 31.5
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.4e-63 248.4 576 34.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.8e-63 248.1 618 40.5
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 2.3e-63 247.7 574 41.8
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.0e-63 246.9 575 46.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 8.9e-63 245.7 577 37.3
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.2e-62 245.4 585 39.0
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 3.4e-62 243.8 572 39.9
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 7.5e-62 242.7 514 52.7
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.3e-61 241.9 574 46.2
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 2.2e-61 241.1 575 37.7
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 3.7e-61 240.4 585 38.8
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 6.4e-61 239.6 547 39.7
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.9e-60 238.0 609 33.0
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.9e-60 238.0 573 41.0
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 3.2e-60 237.3 580 44.7
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 9.2e-60 235.7 605 34.0
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 2.7e-59 234.2 576 43.9
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.6e-59 233.4 614 36.8
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 4.6e-59 233.4 511 43.1
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 7.8e-59 232.6 597 51.1
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.0e-58 232.3 573 38.9
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.3e-58 231.9 575 39.5
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 1.7e-58 231.5 573 45.0
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.7e-58 231.5 575 40.9
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.9e-58 230.3 512 43.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 8.6e-58 229.2 572 49.7
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.9e-57 228.0 623 39.5
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.6e-56 224.9 580 39.0
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 8.1e-56 222.6 577 47.1
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 8.1e-56 222.6 614 46.6
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 8.1e-56 222.6 576 42.5
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.1e-55 222.2 577 48.0
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.4e-55 221.9 576 42.2
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 2.3e-55 221.1 577 42.1
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 8.9e-55 219.2 583 48.5
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 1.2e-54 218.8 572 45.1
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.6e-54 217.6 576 42.5
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 4.4e-54 216.9 540 33.9
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.9e-53 213.4 543 44.8
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 8.3e-53 212.6 576 38.9
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 3.2e-52 210.7 593 41.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 3.5e-51 207.2 592 40.0
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.7e-50 204.9 583 40.1
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 3.6e-48 197.2 586 36.9
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 3.6e-48 197.2 586 36.9
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 4.7e-48 196.8 591 36.7
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 4.7e-48 196.8 591 36.7
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.4e-47 195.3 586 36.7
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 6.4e-45 186.4 593 38.8
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.4e-44 185.3 583 45.6
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.9e-44 184.9 576 46.4
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.9e-42 177.2 384 48.7
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 6.6e-42 176.4 592 44.6
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 8.6e-42 176.0 367 42.0
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 5.6e-41 173.3 363 33.6
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.1e-40 171.4 544 41.0
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 3.6e-40 170.6 578 40.1
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 4.7e-40 170.2 518 37.1
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 1.4e-39 168.7 576 45.1
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.8e-39 168.3 573 45.5
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 9.9e-38 162.5 577 41.9
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 2.9e-37 161.0 615 24.4
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 2.9e-37 161.0 520 36.2
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 6.4e-37 159.8 321 42.4
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 1.1e-36 159.1 497 39.4
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 4.6e-35 153.7 589 44.8
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.3e-32 145.6 320 56.2
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-32 144.1 329 40.4
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 7.6e-30 136.3 500 31.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 2.9e-29 134.4 379 28.2
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.1e-26 123.6 593 24.1
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.1e-26 123.6 593 24.1
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 6.2e-24 116.7 526 35.6
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.3e-18 99.0 151 41.7
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.1e-17 95.9 205 32.2
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 6.0e-11 73.6 216 44.9
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.7e-09 67.0 179 26.3
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 9.6e-09 66.2 89 44.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.3e-08 65.9 116 37.9
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 7.6e-06 56.6 48 64.6


User provided reference genes

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