Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb344610 Zea mays HOM05D004867 ORTHO05D005729 1.5e-139 499.6 261 100.0
Zm00001eb183460 Zea mays HOM05D004867 ORTHO05D005729 6.2e-106 387.9 261 81.6
Zm00001eb245770 Zea mays HOM05D004867 ORTHO05D005729 1.6e-40 170.6 94 94.7
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 4.0e-36 156.0 259 43.6
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 2.6e-35 153.3 263 42.2
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 4.4e-35 152.5 245 42.4
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 5.7e-35 152.1 219 47.0
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 2.4e-33 146.7 237 43.9
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 3.2e-33 146.4 255 39.6
Peaxi162Scf00081g00024 Petunia axillaris HOM05D004867 ORTHO05D005729 3.2e-33 146.4 266 40.6
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 4.1e-33 146.0 246 41.5
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 4.1e-33 146.0 246 41.5
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 9.2e-33 144.8 258 42.2
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 1.6e-32 144.1 245 42.0
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 1.6e-32 144.1 245 41.2
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 2.7e-32 143.3 246 40.7
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 2.7e-32 143.3 286 39.5
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 4.6e-32 142.5 246 39.8
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 4.6e-32 142.5 280 38.6
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 1.0e-31 141.4 256 40.2
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 1.3e-31 141.0 243 40.7
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 8.6e-31 138.3 242 41.3
Migut.B01348 Erythranthe guttata HOM05D004867 ORTHO05D005729 8.6e-31 138.3 244 40.2
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 8.6e-31 138.3 251 41.8
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 1.1e-30 137.9 264 40.2
Actinidia21571 Actinidia chinensis HOM05D004867 ORTHO05D005729 1.5e-30 137.5 208 44.2
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 2.5e-30 136.7 268 37.7
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 3.3e-30 136.3 238 40.8
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 3.3e-30 136.3 269 38.3
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 4.3e-30 136.0 252 39.3
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 5.6e-30 135.6 274 39.4
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 5.6e-30 135.6 269 37.9
Carub.0004s1428 Capsella rubella HOM05D004867 ORTHO05D005729 7.3e-30 135.2 238 40.8
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 7.3e-30 135.2 274 38.7
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 9.5e-30 134.8 266 41.0
ATR0605G176 Amborella trichopoda HOM05D004867 ORTHO05D005729 1.2e-29 134.4 245 39.6
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 1.6e-29 134.0 226 40.7
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 2.1e-29 133.7 250 40.0
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 2.8e-29 133.3 261 39.8
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 8.0e-29 131.7 235 42.1
SGA_v2.0_scaffold5G03115 Striga asiatica HOM05D004867 ORTHO05D005729 8.0e-29 131.7 258 38.4
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 8.0e-29 131.7 237 42.2
BcaB01g03940 Brassica carinata HOM05D004867 ORTHO05D005729 1.0e-28 131.3 231 40.3
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 1.4e-28 131.0 243 39.5
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.4e-28 131.0 235 42.1
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 1.4e-28 131.0 244 41.8
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 1.8e-28 130.6 235 42.1
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 1.8e-28 130.6 241 42.7
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 1.8e-28 130.6 274 38.0
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 5.2e-28 129.0 263 36.5
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 5.2e-28 129.0 235 41.7
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 6.8e-28 128.6 232 41.4
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 8.9e-28 128.3 234 39.7
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 1.2e-27 127.9 225 42.2
Sc01g0010400 Simmondsia chinensis HOM05D004867 ORTHO05D005729 1.5e-27 127.5 223 39.9
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 2.6e-27 126.7 258 39.5
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 3.4e-27 126.3 236 41.1
Ah.13g072190 Amaranthus hybridus HOM05D004867 ORTHO05D005729 4.4e-27 125.9 230 41.3
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 4.4e-27 125.9 236 39.4
Sp4g15230 Schrenkiella parvula HOM05D004867 ORTHO05D005729 5.8e-27 125.6 239 38.9
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea HOM05D004867 ORTHO05D005729 7.5e-27 125.2 229 41.0
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 1.7e-26 124.0 233 38.2
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 2.2e-26 123.6 311 36.7
CARHR126800 Cardamine hirsuta HOM05D004867 ORTHO05D005729 4.9e-26 122.5 237 40.9
Dinv43921 Davidia involucrata HOM05D004867 ORTHO05D005729 4.9e-26 122.5 176 45.5
Aa31LG5G4500 Aethionema arabicum HOM05D004867 ORTHO05D005729 6.4e-26 122.1 232 38.8
CAN.G1393.5 Capsicum annuum HOM05D004867 ORTHO05D005729 8.3e-26 121.7 267 35.2
CAN.G3313.1 Capsicum annuum HOM05D004867 ORTHO05D005729 8.3e-26 121.7 267 35.2
CDE10G0581 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 1.9e-25 120.6 259 37.1
AL4G28350 Arabidopsis lyrata HOM05D004867 ORTHO05D005729 2.4e-25 120.2 238 37.8
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 2.4e-25 120.2 241 36.9
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 2.4e-25 120.2 251 39.0
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 3.2e-25 119.8 238 38.2
BcaC01g05864 Brassica carinata HOM05D004867 ORTHO05D005729 5.4e-25 119.0 228 38.2
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 5.4e-25 119.0 245 40.0
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 7.0e-25 118.6 247 39.3
AT2G32850 Arabidopsis thaliana HOM05D004867 ORTHO05D005729 6.0e-24 115.5 229 38.4
HanXRQChr17g0560591 Helianthus annuus HOM05D004867 ORTHO05D005729 6.0e-24 115.5 228 35.5
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 7.8e-24 115.2 234 37.6
C04p16700 Brassica napus HOM05D004867 ORTHO05D005729 1.0e-23 114.8 254 36.6
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 1.3e-23 114.4 253 37.5
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 1.7e-23 114.0 230 36.1
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 2.3e-23 113.6 263 34.2
Lsat_1_v5_gn_4_46360 Lactuca sativa HOM05D001227 ORTHO05D005729 2.3e-23 113.6 201 40.8
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 3.0e-23 113.2 250 36.8
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 3.9e-23 112.8 247 37.2
SGA_v2.0_scaffold260G45878 Striga asiatica HOM05D004867 ORTHO05D005729 3.9e-23 112.8 271 36.2
Thhalv10016354m.g Eutrema salsugineum HOM05D004867 ORTHO05D005729 5.0e-23 112.5 171 44.4
CsaV3_3G032420 Cucumis sativus L. HOM05D004867 ORTHO05D005729 8.6e-23 111.7 229 37.1
Sed0025822 Sechium edule HOM05D004867 ORTHO05D005729 1.1e-22 111.3 231 37.7
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 1.5e-22 110.9 252 35.7
Sed0010975 Sechium edule HOM05D004867 ORTHO05D005729 1.5e-22 110.9 229 36.7
ClCG10G012610 Citrullus lanatus HOM05D004867 ORTHO05D005729 4.3e-22 109.4 229 37.1
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 4.3e-22 109.4 230 37.0
unitig_749.g13484 Utricularia gibba HOM05D004867 ORTHO05D005729 4.3e-22 109.4 230 36.5
MELO3C023945.2 Cucumis melo HOM05D004867 ORTHO05D005729 5.6e-22 109.0 229 36.7
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 7.3e-22 108.6 233 39.5
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 1.2e-21 107.8 233 38.6
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 6.2e-21 105.5 259 34.4
C03p21620 Brassica napus HOM05D004867 ORTHO05D005729 1.4e-20 104.4 228 36.8
BolC3t14546H Brassica oleracea HOM05D004867 ORTHO05D005729 1.4e-20 104.4 228 36.8
A03p18560 Brassica napus HOM05D004867 ORTHO05D005729 1.8e-20 104.0 164 42.7
Lalb_Chr25g0283491 Lupinus albus HOM05D004867 ORTHO05D005729 1.8e-20 104.0 232 38.8
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 2.3e-20 103.6 237 34.6
THA.LOC104816028 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 4.0e-20 102.8 249 37.3
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 6.8e-20 102.1 230 36.5
Actinidia15860 Actinidia chinensis HOM05D004867 ORTHO05D005729 8.9e-20 101.7 190 40.0
BraA03t11115Z Brassica rapa HOM05D004867 ORTHO05D005729 2.6e-19 100.1 166 42.8
CDE07G1317 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 7.5e-19 98.6 227 37.0
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 1.4e-17 94.4 230 35.7
SEGI_25422 Sequoiadendron giganteum HOM05D004867 ORTHO05D005729 3.2e-17 93.2 259 30.9
Zm00001eb094370 Zea mays HOM05D004867 ORTHO05D005729 5.4e-17 92.4 287 34.1
Duzib133G0042 Durio zibethinus HOM05D004867 ORTHO05D005729 8.6e-15 85.1 234 31.2
CDE04G1629 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 1.2e-13 81.3 233 34.3
Lj9C624G5 Lonicera japonica HOM05D004867 ORTHO05D005729 1.6e-13 80.9 248 31.0
HPP92_023783 Vanilla planifolia HOM05D004867 ORTHO05D005729 4.7e-13 79.3 198 34.8
Mapoly0022s0104 Marchantia polymorpha HOM05D004867 ORTHO05D005729 2.2e-10 70.5 232 28.4
Lalb_Chr19g0131991 Lupinus albus HOM05D004867 ORTHO05D005729 4.9e-10 69.3 261 29.5
SMO147G0308 Selaginella moellendorffii HOM05D004867 ORTHO05D005729 3.0e-07 60.1 92 43.5
Pp3c8_15370 Physcomitrium patens HOM05D004867 ORTHO05D005729 4.3e-06 56.2 197 31.0


User provided reference genes

Program Settings