Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb342860 Zea mays HOM05D004905 ORTHO05D005456 5.5e-283 977.2 593 100.0
Os05g0550100 Oryza sativa ssp. japonica HOM05D004905 ORTHO05D005456 7.8e-72 275.8 616 42.7
Zm00001eb156080 Zea mays HOM05D004905 ORTHO05D005456 3.6e-32 144.1 607 31.1
Os01g0692300 Oryza sativa ssp. japonica HOM05D004905 ORTHO05D005456 2.9e-18 97.8 533 31.0
Sabra17G0098200 Salix brachista HOM05D004905 ORTHO05D005456 2.1e-16 91.7 592 26.2
Nitab4.5_0011439g0010 Nicotiana tabacum HOM05D004905 ORTHO05D005456 1.4e-15 89.0 259 31.3
TWI74G1312 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 1.1e-14 85.9 234 30.8
CANSAT11G1581 Cannabis sativa HOM05D004905 ORTHO05D005456 4.4e-14 84.0 414 30.9
Nitab4.5_0000753g0160 Nicotiana tabacum HOM05D004905 ORTHO05D005456 2.2e-13 81.6 259 31.7
Potri.017G118900 Populus trichocarpa HOM05D004905 ORTHO05D005456 2.8e-13 81.3 594 25.8
Medtr7g082660 Medicago truncatula HOM05D004905 ORTHO05D005456 4.8e-13 80.5 334 28.4
QL02p050316 Quercus lobata HOM05D004905 ORTHO05D005456 8.2e-13 79.7 578 27.0
TAR426G0001 Trochodendron aralioides HOM05D004905 ORTHO05D005456 8.2e-13 79.7 538 25.8
Ciclev10011170m.g Citrus clementina HOM05D004905 ORTHO05D005456 1.4e-12 79.0 641 26.5
DCAR_010704 Daucus carota HOM05D004905 ORTHO05D005456 5.3e-12 77.0 529 27.6
SalBow3G3699 Salvia bowleyana HOM05D004905 ORTHO05D005456 7.0e-12 76.6 270 32.6
TPR.G16546 Trifolium pratense HOM05D004905 ORTHO05D005456 7.0e-12 76.6 334 27.8
QL04p012071 Quercus lobata HOM05D004905 ORTHO05D005456 1.6e-11 75.5 568 25.4
Oeu030795.1 Olea europaea HOM05D004905 ORTHO05D005456 3.5e-11 74.3 561 23.9
TAR535G0011 Trochodendron aralioides HOM05D004905 ORTHO05D005456 3.5e-11 74.3 538 27.3
Sopen02g031010 Solanum pennellii HOM05D004905 ORTHO05D005456 4.5e-11 73.9 292 28.8
Aqoxy3G04036 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 5.9e-11 73.6 545 27.2
Lalb_Chr04g0257631 Lupinus albus HOM05D004905 ORTHO05D005456 1.0e-10 72.8 316 27.5
Carub.0005s1253 Capsella rubella HOM05D004905 ORTHO05D005456 2.9e-10 71.2 272 27.2
COL.COLO4_09375 Corchorus olitorius HOM05D004905 ORTHO05D005456 5.0e-10 70.5 571 26.1
Solyc02g086350.3 Solanum lycopersicum HOM05D004905 ORTHO05D005456 6.5e-10 70.1 292 28.8
CDE02G1873 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 8.5e-10 69.7 220 33.6
Gorai.001G202800 Gossypium raimondii HOM05D004905 ORTHO05D005456 8.5e-10 69.7 214 30.4
Potri.004G095800 Populus trichocarpa HOM05D004905 ORTHO05D005456 1.1e-09 69.3 613 26.8
TWI53G1125 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 1.5e-09 68.9 608 25.0
Gohir.D07G181800 Gossypium hirsutum HOM05D004905 ORTHO05D005456 1.9e-09 68.6 214 30.4
Sc10g0001050 Simmondsia chinensis HOM05D004905 ORTHO05D005456 1.9e-09 68.6 177 32.2
BcaC08g46129 Brassica carinata HOM05D004905 ORTHO05D005456 2.5e-09 68.2 328 27.4
CSS0040498 Camellia sinensis var. sinensis HOM05D004905 ORTHO05D005456 4.2e-09 67.4 535 25.6
CiPaw.03G064700 Carya illinoinensis HOM05D004905 ORTHO05D005456 5.5e-09 67.0 173 29.5
C06p40220 Brassica napus HOM05D000005 ORTHO05D005456 7.2e-09 66.6 329 27.1
BolC6t39105H Brassica oleracea HOM05D004905 ORTHO05D005456 1.2e-08 65.9 329 26.7
VMungo0464G1170 Vigna mungo HOM05D004905 ORTHO05D005456 1.2e-08 65.9 601 24.5
Haze_14185 Corylus avellana HOM05D004905 ORTHO05D005456 1.6e-08 65.5 572 25.7
BcaB06g27171 Brassica carinata HOM05D004905 ORTHO05D005456 2.1e-08 65.1 232 28.0
Duzib138G0198 Durio zibethinus HOM05D004905 ORTHO05D005456 2.1e-08 65.1 633 23.5
Manes.02G071500 Manihot esculenta HOM05D004905 ORTHO05D005456 2.1e-08 65.1 158 32.9
MSTRG.23594 Avicennia marina HOM05D004905 ORTHO05D005456 2.7e-08 64.7 308 29.9
Lsat_1_v5_gn_2_80961 Lactuca sativa HOM05D004905 ORTHO05D005456 2.7e-08 64.7 497 26.0
Gohir.A07G175500 Gossypium hirsutum HOM05D004905 ORTHO05D005456 3.6e-08 64.3 214 29.4
Ca_08091_v3 Cicer arietinum L. HOM05D004905 ORTHO05D005456 4.7e-08 63.9 571 24.5
Eucgr.F02791 Eucalyptus grandis HOM05D004905 ORTHO05D005456 4.7e-08 63.9 640 24.2
PGSC0003DMG400026397 Solanum tuberosum HOM05D004905 ORTHO05D005456 4.7e-08 63.9 328 27.7
Cfa007892 Carpinus fangiana HOM05D004905 ORTHO05D005456 8.0e-08 63.2 512 25.2
Cc07_g08530 Coffea canephora HOM05D004905 ORTHO05D005456 8.0e-08 63.2 173 30.1
CAN.G625.56 Capsicum annuum HOM05D004905 ORTHO05D005456 1.0e-07 62.8 212 29.2
Nn3g17953 Nelumbo nucifera HOM05D004905 ORTHO05D005456 1.4e-07 62.4 303 29.7
Glyma.02G089100 Glycine max HOM05D001288 ORTHO05D001123 1.8e-07 62.0 93 41.9
Rhsim10G0072700 Rhododendron simsii HOM05D004905 ORTHO05D005456 1.8e-07 62.0 175 31.4
BraA07t30992Z Brassica rapa HOM05D004905 ORTHO05D005456 2.3e-07 61.6 328 26.5
SGA_v2.0_scaffold202G41468 Striga asiatica HOM05D004905 ORTHO05D005456 2.3e-07 61.6 222 26.6
Dinv34793 Davidia involucrata HOM05D004905 ORTHO05D005456 6.8e-07 60.1 171 31.0
Carub.0002s1304 Capsella rubella HOM05D004905 ORTHO05D005456 1.2e-06 59.3 238 26.5
Cpa.g.sc170.31 Carica papaya HOM05D004905 ORTHO05D005456 1.2e-06 59.3 263 33.8
Psat3g097720 Pisum sativum HOM05D004905 ORTHO05D005456 1.2e-06 59.3 574 24.6
ATR0681G096 Amborella trichopoda HOM05D004905 ORTHO05D005456 1.5e-06 58.9 96 36.5
MD09G1256700 Malus domestica HOM05D004905 ORTHO05D005456 1.5e-06 58.9 118 33.1
A07p33640 Brassica napus HOM05D004905 ORTHO05D005456 2.0e-06 58.5 328 25.9
vmacro22954 Vaccinium macrocarpon HOM05D004905 ORTHO05D005456 2.0e-06 58.5 171 32.7
C04p44880 Brassica napus HOM05D004905 ORTHO05D005456 2.6e-06 58.2 308 26.3
Hma1.2p1_0500F.1_g167210 Hydrangea macrophylla HOM05D004905 ORTHO05D005456 2.6e-06 58.2 93 38.7
HPP92_008194 Vanilla planifolia HOM05D004905 ORTHO05D005456 2.6e-06 58.2 210 31.9
BcaC02g09630 Brassica carinata HOM05D004905 ORTHO05D005456 4.4e-06 57.4 262 26.3
A04p11140 Brassica napus HOM05D004905 ORTHO05D005456 4.4e-06 57.4 311 25.7
AL2G25050 Arabidopsis lyrata HOM05D004905 ORTHO05D005456 7.5e-06 56.6 281 25.6
ECA238G0899 Erigeron canadensis HOM05D004905 ORTHO05D005456 7.5e-06 56.6 460 23.5
Actinidia15900 Actinidia chinensis HOM05D004905 ORTHO05D005456 9.7e-06 56.2 264 25.0
CDE08G0600 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 9.7e-06 56.2 229 29.7
VMungo1383G0301 Vigna mungo HOM05D004905 ORTHO05D005456 9.7e-06 56.2 90 40.0


User provided reference genes

Program Settings