Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 9.8e-56 219.9 114 100.0
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 3.2e-54 214.9 114 97.4
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 1.1e-43 179.9 105 89.5
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 9.5e-43 176.8 114 77.2
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.6e-29 132.9 113 56.6
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 7.8e-29 130.6 113 55.8
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 7.8e-29 130.6 113 56.6
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 2.3e-28 129.0 113 56.6
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 5.1e-28 127.9 113 55.8
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 6.6e-28 127.5 113 55.8
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 8.6e-28 127.1 113 56.6
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.1e-27 126.7 114 55.3
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.1e-27 126.7 113 56.6
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 1.9e-27 125.9 113 54.0
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 2.5e-27 125.6 113 54.9
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 3.3e-27 125.2 113 54.0
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 3.3e-27 125.2 113 54.0
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 3.3e-27 125.2 113 52.2
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 4.3e-27 124.8 113 56.6
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 5.6e-27 124.4 113 55.8
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 9.6e-27 123.6 113 51.3
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.2e-26 123.2 113 54.0
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.6e-26 122.9 113 53.1
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.6e-26 122.9 114 51.8
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 1.6e-26 122.9 113 51.3
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.8e-26 122.1 113 55.8
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.8e-26 122.1 113 51.3
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 2.8e-26 122.1 113 51.3
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.8e-26 122.1 113 53.1
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 3.6e-26 121.7 114 51.8
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.7e-26 121.3 113 54.0
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 4.7e-26 121.3 113 51.3
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 6.2e-26 120.9 113 50.4
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 6.2e-26 120.9 113 50.4
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.1e-25 120.2 107 57.0
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.1e-25 120.2 114 50.0
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 1.1e-25 120.2 107 57.0
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 1.1e-25 120.2 111 55.0
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.4e-25 119.8 114 55.3
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.4e-25 119.8 113 54.9
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.4e-25 119.8 113 51.3
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.8e-25 119.4 107 55.1
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.8e-25 119.4 113 54.0
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 1.8e-25 119.4 113 54.0
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 2.4e-25 119.0 113 51.3
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 2.4e-25 119.0 113 50.4
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 3.1e-25 118.6 113 50.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 3.1e-25 118.6 107 56.1
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 4.0e-25 118.2 107 55.1
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 4.0e-25 118.2 107 54.2
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 4.0e-25 118.2 106 52.8
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 4.0e-25 118.2 113 51.3
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 4.0e-25 118.2 113 51.3
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 5.2e-25 117.9 113 49.6
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 6.9e-25 117.5 114 51.8
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 8.9e-25 117.1 117 51.3
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 8.9e-25 117.1 113 53.1
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 1.2e-24 116.7 113 51.3
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.2e-24 116.7 113 50.4
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.5e-24 116.3 113 54.0
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 2.0e-24 115.9 113 51.3
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.0e-24 115.9 113 48.7
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.0e-24 115.9 113 52.2
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.0e-24 115.9 113 52.2
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 2.6e-24 115.5 114 51.8
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 3.4e-24 115.2 107 52.3
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 3.4e-24 115.2 113 51.3
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 7.6e-24 114.0 113 52.2
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 1.3e-23 113.2 114 48.2
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.9e-23 112.1 115 52.2
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.9e-23 112.1 116 50.0
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 3.8e-23 111.7 113 46.9
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 3.8e-23 111.7 113 48.7
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 3.8e-23 111.7 115 52.2
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 6.4e-23 110.9 114 50.0
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.1e-22 110.2 113 46.9
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 1.4e-22 109.8 114 47.4
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 1.4e-22 109.8 114 47.4
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 1.4e-22 109.8 128 45.3
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.4e-22 109.8 113 48.7
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.9e-22 109.4 114 46.5
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 2.4e-22 109.0 134 41.8
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 4.2e-22 108.2 107 49.5
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.7e-21 105.5 107 52.3
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 6.0e-21 104.4 114 50.9
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 6.0e-21 104.4 114 50.9
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 7.8e-21 104.0 114 50.0
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 7.8e-21 104.0 114 50.0
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 7.8e-21 104.0 108 50.0
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 1.3e-20 103.2 114 47.4
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.3e-20 103.2 114 50.0
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 2.3e-20 102.4 114 49.1
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 3.9e-20 101.7 114 49.1
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 5.1e-20 101.3 114 46.5
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 6.6e-20 100.9 114 47.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 1.5e-19 99.8 107 51.4
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 1.5e-19 99.8 107 51.4
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.5e-19 99.8 114 47.4
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 5.6e-19 97.8 114 45.6
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 6.2e-18 94.4 113 47.8
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 1.1e-17 93.6 78 60.3
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 9.0e-17 90.5 132 40.9
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.5e-16 88.2 113 45.1
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 4.9e-15 84.7 113 42.5
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 2.4e-14 82.4 125 44.0
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 4.6e-13 78.2 114 38.6
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 4.3e-11 71.6 50 70.0
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 3.6e-10 68.6 53 60.4
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 4.8e-10 68.2 115 36.5
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.4e-09 66.6 52 61.5
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.4e-09 66.6 69 52.2
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.4e-09 65.9 53 66.0
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 2.4e-09 65.9 52 59.6
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 4.0e-09 65.1 52 57.7
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 1.5e-08 63.2 38 81.6
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 3.4e-08 62.0 60 43.3
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.1e-06 57.0 60 43.3
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 5.5e-06 54.7 53 43.4


User provided reference genes

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