Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb339780 Zea mays HOM05D000059 ORTHO05D009759 0.0e+00 1183.7 582 100.0
Zm00001eb255740 Zea mays HOM05D000059 ORTHO05D009759 1.3e-87 328.2 181 90.1
Zm00001eb238360 Zea mays HOM05D000059 ORTHO05D002425 6.5e-87 325.9 194 82.0
Zm00001eb306730 Zea mays HOM05D000059 ORTHO05D009759 5.9e-56 223.0 142 76.1
Os05g0489900 Oryza sativa ssp. japonica HOM05D000059 ORTHO05D009759 4.7e-53 213.4 167 65.3
Psat4g141880 Pisum sativum HOM05D000059 ORTHO05D009759 4.8e-50 203.4 305 43.3
CiPaw.13G047900 Carya illinoinensis HOM05D000059 ORTHO05D009759 1.8e-49 201.4 169 59.2
MBI19_g28108_MAGBIO Magnolia biondii HOM05D000059 ORTHO05D009759 1.8e-49 201.4 177 58.8
DCAR_023134 Daucus carota HOM05D000059 ORTHO05D009759 2.0e-48 198.0 177 57.1
Lalb_Chr19g0132601 Lupinus albus HOM05D000059 ORTHO05D009759 2.0e-48 198.0 169 57.4
DCAR_011576 Daucus carota HOM05D000059 ORTHO05D009759 2.7e-48 197.6 177 57.1
TAR633G1052 Trochodendron aralioides HOM05D000059 ORTHO05D009759 3.5e-48 197.2 177 57.6
Manes.10G063500 Manihot esculenta HOM05D000059 ORTHO05D009759 7.7e-48 196.1 166 57.8
PGR142G1020 Punica granatum HOM05D000059 ORTHO05D009759 7.7e-48 196.1 169 59.2
Dinv02047 Davidia involucrata HOM05D000059 ORTHO05D009759 1.3e-47 195.3 191 53.4
Eucgr.G02633 Eucalyptus grandis HOM05D000059 ORTHO05D009759 2.9e-47 194.1 169 57.4
GSVIVG01027353001 Vitis vinifera HOM05D000059 ORTHO05D009759 3.8e-47 193.7 177 56.5
Atru.chr12.1136 Acer truncatum HOM05D000059 ORTHO05D009759 5.0e-47 193.4 164 57.9
FvH4_5g27182 Fragaria vesca HOM05D000059 ORTHO05D009759 5.0e-47 193.4 169 56.8
FAN18G2260 Fragaria x ananassa HOM05D000059 ORTHO05D009759 5.0e-47 193.4 169 56.8
Phvul.011G186900 Phaseolus vulgaris HOM05D000059 ORTHO05D009759 5.0e-47 193.4 169 56.8
arahy.Tifrunner.gnm1.ann1.DT2ZPD Arachis hypogaea HOM05D000059 ORTHO05D009759 8.6e-47 192.6 169 56.8
arahy.Tifrunner.gnm1.ann1.R5AJY0 Arachis hypogaea HOM05D000059 ORTHO05D009759 8.6e-47 192.6 169 56.8
Potri.010G247400 Populus trichocarpa HOM05D000059 ORTHO05D009759 1.1e-46 192.2 166 56.6
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 1.1e-46 192.2 169 53.8
Glyma.08G227200 Glycine max HOM05D000059 ORTHO05D009759 1.5e-46 191.8 169 56.8
HPP92_017887 Vanilla planifolia HOM05D000059 ORTHO05D009759 1.5e-46 191.8 169 56.8
Sabra10G0192800 Salix brachista HOM05D000059 ORTHO05D009759 2.5e-46 191.0 166 56.0
Ciclev10000859m.g Citrus clementina HOM05D000059 ORTHO05D009759 3.3e-46 190.7 164 57.9
VMungo1127G1077 Vigna mungo HOM05D000059 ORTHO05D009759 4.2e-46 190.3 169 56.2
Rhsim07G0072600 Rhododendron simsii HOM05D000059 ORTHO05D009759 1.2e-45 188.7 169 56.2
RcHm_v2.0_Chr7g0218291 Rosa chinensis HOM05D000059 ORTHO05D009759 1.6e-45 188.3 169 55.6
Actinidia12137 Actinidia chinensis HOM05D000059 ORTHO05D009759 2.1e-45 188.0 167 57.5
Aqoxy1G04298 Aquilegia oxysepala HOM05D000059 ORTHO05D009759 2.1e-45 188.0 167 57.5
Cfa010436 Carpinus fangiana HOM05D000059 ORTHO05D009759 2.1e-45 188.0 169 56.2
Lj3g0014051 Lotus japonicus HOM05D000059 ORTHO05D009759 2.1e-45 188.0 169 55.6
Sed0015296 Sechium edule HOM05D000059 ORTHO05D009759 2.1e-45 188.0 166 56.0
COL.COLO4_07153 Corchorus olitorius HOM05D000059 ORTHO05D009759 3.6e-45 187.2 166 56.6
CsaV3_6G004640 Cucumis sativus L. HOM05D000059 ORTHO05D009759 3.6e-45 187.2 166 56.0
Glyma.15G222300 Glycine max HOM05D000059 ORTHO05D009759 3.6e-45 187.2 169 55.6
MD07G1053900 Malus domestica HOM05D000059 ORTHO05D009759 3.6e-45 187.2 169 55.0
vmacro13792 Vaccinium macrocarpon HOM05D000059 ORTHO05D009759 3.6e-45 187.2 169 56.2
CANSAT11G0801 Cannabis sativa HOM05D000059 ORTHO05D009759 8.0e-45 186.0 169 55.0
Cpa.g.sc54.31 Carica papaya HOM05D000059 ORTHO05D009759 1.0e-44 185.7 177 53.7
Duzib114G0502 Durio zibethinus HOM05D000059 ORTHO05D009759 1.0e-44 185.7 164 56.7
Gorai.N006600 Gossypium raimondii HOM05D000059 ORTHO05D009759 4.0e-44 183.7 166 55.4
Oeu013046.1 Olea europaea HOM05D000059 ORTHO05D009759 4.0e-44 183.7 167 55.7
Thecc.10G130400 Theobroma cacao HOM05D000059 ORTHO05D009759 4.0e-44 183.7 164 56.1
Ca_24119_v3 Cicer arietinum L. HOM05D000059 ORTHO05D009759 8.9e-44 182.6 169 54.4
Medtr8g043970 Medicago truncatula HOM05D000059 ORTHO05D009759 8.9e-44 182.6 169 55.0
Lsat_1_v5_gn_8_117641 Lactuca sativa HOM05D000059 ORTHO05D009759 1.2e-43 182.2 164 56.7
TPR.G25025 Trifolium pratense HOM05D000059 ORTHO05D009759 1.2e-43 182.2 169 55.0
TWI38G0951 Tripterygium wilfordii HOM05D000059 ORTHO05D009759 1.5e-43 181.8 164 54.9
FAN08G3269 Fragaria x ananassa HOM05D000059 ORTHO05D009759 2.0e-43 181.4 188 50.5
HanXRQChr09g0258271 Helianthus annuus HOM05D000059 ORTHO05D009759 4.4e-43 180.3 167 54.5
Peaxi162Scf00647g00529 Petunia axillaris HOM05D000059 ORTHO05D009759 9.8e-43 179.1 167 55.7
Cc08_g09570 Coffea canephora HOM05D000059 ORTHO05D009759 1.3e-42 178.7 167 54.5
ECA232G4524 Erigeron canadensis HOM05D002501 ORTHO05D009759 1.3e-42 178.7 167 54.5
PSO384G3320 Papaver somniferum HOM05D000059 ORTHO05D009759 2.2e-42 177.9 167 53.3
PSO339G3396 Papaver somniferum HOM05D000059 ORTHO05D009759 2.4e-41 174.5 167 52.1
ATR0307G069 Amborella trichopoda HOM05D000059 ORTHO05D009759 3.1e-41 174.1 177 50.8
Hma1.2p1_0233F.1_g098010 Hydrangea macrophylla HOM05D000059 ORTHO05D009759 4.1e-41 173.7 197 49.2
SEGI_19769 Sequoiadendron giganteum HOM05D000059 ORTHO05D009759 1.6e-40 171.8 166 54.2
CAN.G134.45 Capsicum annuum HOM05D000059 ORTHO05D009759 4.5e-40 170.2 164 54.9
Migut.N01872 Erythranthe guttata HOM05D000059 ORTHO05D009759 5.9e-40 169.9 167 52.1
SMO353G0224 Selaginella moellendorffii HOM05D000059 ORTHO05D009759 2.3e-39 167.9 141 56.7
PGSC0003DMG400027527 Solanum tuberosum HOM05D000059 ORTHO05D009759 3.8e-39 167.2 164 54.3
SalBow6G6738 Salvia bowleyana HOM05D000059 ORTHO05D009759 1.5e-38 165.2 167 51.5
Haze_03390 Corylus avellana HOM05D000059 ORTHO05D009759 1.9e-38 164.9 228 43.0
Nn7g37296 Nelumbo nucifera HOM05D000059 ORTHO05D009759 2.5e-38 164.5 167 49.7
Haze_03394 Corylus avellana HOM05D000059 ORTHO05D009759 9.5e-38 162.5 228 43.0
CSS0013163 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 8.0e-37 159.5 111 65.8
CSS0038335 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 8.0e-37 159.5 111 65.8
Gohir.D06G178600 Gossypium hirsutum HOM05D000059 ORTHO05D009759 8.9e-36 156.0 112 63.4
Solyc01g096820.4 Solanum lycopersicum HOM05D000059 ORTHO05D009759 8.9e-36 156.0 157 53.5
Sopen01g040520 Solanum pennellii HOM05D000059 ORTHO05D009759 4.4e-35 153.7 157 52.2
ClCG08G008620 Citrullus lanatus HOM05D000059 ORTHO05D009759 1.2e-32 145.6 166 47.6
Nitab4.5_0002687g0090 Nicotiana tabacum HOM05D000059 ORTHO05D009759 2.7e-32 144.4 138 55.1
Nitab4.5_0006602g0020 Nicotiana tabacum HOM05D000059 ORTHO05D009759 3.0e-31 141.0 132 56.1
MELO3C019932.2 Cucumis melo HOM05D000059 ORTHO05D009759 1.8e-28 131.7 92 64.1
Pp3c21_15330 Physcomitrium patens HOM05D000059 ORTHO05D009759 1.8e-28 131.7 139 45.3
Potri.008G011541 Populus trichocarpa HOM05D000059 ORTHO05D009759 1.3e-26 125.6 142 49.3
Gohir.A06G170800 Gossypium hirsutum HOM05D000059 ORTHO05D009759 2.2e-26 124.8 94 59.6
HPP92_017883 Vanilla planifolia HOM05D000059 ORTHO05D009759 6.4e-26 123.2 337 31.5
AagrBONN_evm.TU.Sc2ySwM_344.2077 Anthoceros agrestis HOM05D000059 ORTHO05D009759 8.9e-20 102.8 94 53.2
CBR_g24449 Chara braunii HOM05D000059 ORTHO05D009759 8.9e-20 102.8 88 51.1
Zm00001eb189530 Zea mays HOM05D002368 ORTHO05D002425 1.4e-09 68.9 68 60.3
Zm00001eb253320 Zea mays HOM05D002368 ORTHO05D002425 9.2e-09 66.2 68 57.4
Os02g0726400 Oryza sativa ssp. japonica HOM05D002368 ORTHO05D002425 1.2e-08 65.9 65 58.5
Zm00001eb200350 Zea mays HOM05D000059 ORTHO05D009759 4.6e-08 63.9 34 85.3
Cpa.g.sc54.33 Carica papaya HOM05D000059 ORTHO05D034084 6.0e-08 63.5 77 46.8
QL04p050714 Quercus lobata HOM05D000059 ORTHO05D009759 6.6e-07 60.1 34 82.4
Lj9C661T5 Lonicera japonica HOM05D000059 ORTHO05D009759 2.5e-06 58.2 39 74.4
Mapoly0034s0072 Marchantia polymorpha HOM05D000059 ORTHO05D009759 3.3e-06 57.8 44 59.1
AUR62036545 Chenopodium quinoa HOM05D001447 ORTHO05D005061 5.6e-06 57.0 97 42.3


User provided reference genes

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