Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb336830 Zea mays HOM05D001781 ORTHO05D001711 1.1e-134 483.4 258 100.0
Os01g0174600 Oryza sativa ssp. japonica HOM05D001781 ORTHO05D001711 3.3e-19 99.8 250 32.4
Psat4g041600 Pisum sativum HOM05D001781 ORTHO05D001711 4.7e-13 79.3 212 33.0
AUR62033468 Chenopodium quinoa HOM05D001781 ORTHO05D001711 2.8e-10 70.1 194 27.8
SEGI_31390 Sequoiadendron giganteum HOM05D001781 ORTHO05D001711 1.1e-09 68.2 101 36.6
SMO147G0410 Selaginella moellendorffii HOM05D001781 ORTHO05D001711 2.4e-09 67.0 91 39.6
Hund21486 Selenicereus undatus HOM05D001781 ORTHO05D001711 5.4e-09 65.9 118 32.2
CDE06G2319 Ceratophyllum demersum HOM05D001781 ORTHO05D001711 7.0e-09 65.5 99 37.4
Nn1g00137 Nelumbo nucifera HOM05D001781 ORTHO05D001711 7.0e-09 65.5 102 36.3
CDE12G0912 Ceratophyllum demersum HOM05D001781 ORTHO05D001711 9.1e-09 65.1 99 36.4
Lsat_1_v5_gn_8_58860 Lactuca sativa HOM05D001781 ORTHO05D001711 9.1e-09 65.1 97 36.1
EL10Ac5g12613 Beta vulgaris HOM05D001781 ORTHO05D001711 1.2e-08 64.7 130 33.8
ATR0057G116 Amborella trichopoda HOM05D001781 ORTHO05D001711 2.0e-08 63.9 101 35.6
Migut.K00116 Erythranthe guttata HOM05D001781 ORTHO05D001711 2.0e-08 63.9 104 33.7
Gohir.A11G031300 Gossypium hirsutum HOM05D001781 ORTHO05D001711 2.7e-08 63.5 120 32.5
Gohir.D11G030000 Gossypium hirsutum HOM05D001781 ORTHO05D001711 2.7e-08 63.5 120 32.5
Gorai.007G032800 Gossypium raimondii HOM05D001781 ORTHO05D001711 2.7e-08 63.5 120 32.5
MD06G1036400 Malus domestica HOM05D001781 ORTHO05D001711 2.7e-08 63.5 102 36.3
HPP92_015975 Vanilla planifolia HOM05D001781 ORTHO05D001711 2.7e-08 63.5 213 25.4
Hund09807 Selenicereus undatus HOM05D001781 ORTHO05D001711 3.5e-08 63.2 102 35.3
Sc08g0006760 Simmondsia chinensis HOM05D001781 ORTHO05D001711 3.5e-08 63.2 129 34.1
Lsat_1_v5_gn_8_57420 Lactuca sativa HOM05D001781 ORTHO05D001711 4.5e-08 62.8 96 34.4
PSO210G1936 Papaver somniferum HOM05D001781 ORTHO05D001711 4.5e-08 62.8 134 33.6
Psat4g041560 Pisum sativum HOM05D001781 ORTHO05D001711 4.5e-08 62.8 243 27.6
TAR375G0425 Trochodendron aralioides HOM05D001781 ORTHO05D001711 4.5e-08 62.8 102 35.3
AT2G35430 Arabidopsis thaliana HOM05D001781 ORTHO05D001711 5.9e-08 62.4 192 27.1
Lsat_1_v5_gn_8_58880 Lactuca sativa HOM05D001781 ORTHO05D001711 5.9e-08 62.4 100 35.0
Peaxi162Scf00516g00651 Petunia axillaris HOM05D001781 ORTHO05D001711 5.9e-08 62.4 104 34.6
vmacro14180 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 5.9e-08 62.4 102 35.3
PSO063G3452 Papaver somniferum HOM05D001781 ORTHO05D001711 7.7e-08 62.0 118 33.1
SMO118G0114 Selaginella moellendorffii HOM05D001781 ORTHO05D001711 7.7e-08 62.0 97 37.1
EL10Ac3g05051 Beta vulgaris HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 35.3
Cc08_g02980 Coffea canephora HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 36.3
Duzib205G1979 Durio zibethinus HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 34.3
ECA233G5145 Erigeron canadensis HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 34.3
Sc13g0010950 Simmondsia chinensis HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 34.3
Thecc.03G225100 Theobroma cacao HOM05D001781 ORTHO05D001711 1.0e-07 61.6 102 34.3
AUR62011086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.3e-07 61.2 129 31.0
Duzib084G0329 Durio zibethinus HOM05D001781 ORTHO05D001711 1.3e-07 61.2 103 35.0
Lsat_1_v5_gn_6_4040 Lactuca sativa HOM05D001781 ORTHO05D001711 1.3e-07 61.2 102 34.3
CSS0048099 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 1.7e-07 60.8 102 34.3
AUR62002086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.7e-07 60.8 102 35.3
AUR62028204 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.7e-07 60.8 102 35.3
Dinv25228 Davidia involucrata HOM05D001781 ORTHO05D001711 1.7e-07 60.8 102 34.3
Dinv29133 Davidia involucrata HOM05D001781 ORTHO05D001711 1.7e-07 60.8 97 37.1
Eucgr.E00271 Eucalyptus grandis HOM05D001781 ORTHO05D001711 1.7e-07 60.8 102 34.3
PGSC0003DMG400026471 Solanum tuberosum HOM05D001781 ORTHO05D001711 1.7e-07 60.8 104 33.7
Duzib068G0201 Durio zibethinus HOM05D001781 ORTHO05D001711 2.2e-07 60.5 102 34.3
Gohir.D12G210000 Gossypium hirsutum HOM05D001781 ORTHO05D001711 2.2e-07 60.5 120 31.7
Gorai.008G225600 Gossypium raimondii HOM05D001781 ORTHO05D001711 2.2e-07 60.5 120 31.7
PSO782G1848 Papaver somniferum HOM05D001781 ORTHO05D001711 2.2e-07 60.5 118 33.1
Pp3c1_20290 Physcomitrium patens HOM05D001781 ORTHO05D001711 2.2e-07 60.5 137 29.2
QL12p004835 Quercus lobata HOM05D001781 ORTHO05D001711 2.2e-07 60.5 102 34.3
Sed0021791 Sechium edule HOM05D001781 ORTHO05D001711 2.2e-07 60.5 103 35.9
SGA_v2.0_scaffold273G46405 Striga asiatica HOM05D001781 ORTHO05D001711 2.2e-07 60.5 108 32.4
Actinidia14796 Actinidia chinensis HOM05D001781 ORTHO05D001711 2.9e-07 60.1 99 36.4
Lalb_Chr09g0325591 Lupinus albus HOM05D001781 ORTHO05D001711 2.9e-07 60.1 98 36.7
Lalb_Chr16g0381271 Lupinus albus HOM05D001781 ORTHO05D001711 2.9e-07 60.1 98 35.7
MBI06_g09277_MAGBIO Magnolia biondii HOM05D001781 ORTHO05D001711 2.9e-07 60.1 104 34.6
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 2.9e-07 60.1 139 28.1
Os08g0159800 Oryza sativa ssp. japonica HOM05D001781 ORTHO05D001711 2.9e-07 60.1 110 35.5
SalBow1G3291 Salvia bowleyana HOM05D001781 ORTHO05D001711 2.9e-07 60.1 110 33.6
MSTRG.4855 Avicennia marina HOM05D001781 ORTHO05D001711 3.8e-07 59.7 99 35.4
CANSAT54G1881 Cannabis sativa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 102 34.3
CANSAT56G1364 Cannabis sativa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 102 34.3
COL.COLO4_17000 Corchorus olitorius HOM05D001781 ORTHO05D001711 3.8e-07 59.7 120 32.5
FvH4_5g22400 Fragaria vesca HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
FAN08G0159 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
FAN13G2503 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
FAN18G3931 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
FAN18G4246 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
Gohir.A12G207600 Gossypium hirsutum HOM05D001781 ORTHO05D001711 3.8e-07 59.7 120 30.8
HanXRQChr13g0395141 Helianthus annuus HOM05D001781 ORTHO05D001711 3.8e-07 59.7 102 34.3
Lj2C236T4 Lonicera japonica HOM05D001781 ORTHO05D001711 3.8e-07 59.7 104 35.6
PGR042G1951 Punica granatum HOM05D001781 ORTHO05D001711 3.8e-07 59.7 96 34.4
Rhsim07G0128600 Rhododendron simsii HOM05D001781 ORTHO05D001711 3.8e-07 59.7 102 34.3
RcHm_v2.0_Chr7g0210151 Rosa chinensis HOM05D001781 ORTHO05D001711 3.8e-07 59.7 107 32.7
SalBow5G0702 Salvia bowleyana HOM05D001781 ORTHO05D001711 3.8e-07 59.7 137 31.4
SalBow5G2617 Salvia bowleyana HOM05D001781 ORTHO05D001711 3.8e-07 59.7 99 36.4
Aqoxy3G02311 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 5.0e-07 59.3 102 33.3
FAN04G2783 Fragaria x ananassa HOM05D001781 ORTHO05D001711 5.0e-07 59.3 107 32.7
Lj4g0027970 Lotus japonicus HOM05D001781 ORTHO05D001711 5.0e-07 59.3 103 35.9
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 5.0e-07 59.3 103 31.1
Prupe.5G033000 Prunus persica HOM05D001781 ORTHO05D001711 5.0e-07 59.3 102 35.3
TWI81G0595 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 5.0e-07 59.3 98 35.7
unitig_8.g3397 Utricularia gibba HOM05D001781 ORTHO05D001711 5.0e-07 59.3 96 36.5
GSVIVG01013136001 Vitis vinifera HOM05D001781 ORTHO05D001711 5.0e-07 59.3 102 33.3
Cfa012462 Carpinus fangiana HOM05D001781 ORTHO05D001711 6.5e-07 58.9 99 34.3
Haze_08197 Corylus avellana HOM05D001781 ORTHO05D001711 6.5e-07 58.9 99 34.3
Manes.17G014300 Manihot esculenta HOM05D001781 ORTHO05D001711 6.5e-07 58.9 100 34.0
Nitab4.5_0000021g0790 Nicotiana tabacum HOM05D001781 ORTHO05D001711 6.5e-07 58.9 106 34.0
ClCG09G011800 Citrullus lanatus HOM05D001781 ORTHO05D001711 8.5e-07 58.5 102 34.3
Dinv28971 Davidia involucrata HOM05D001781 ORTHO05D001711 8.5e-07 58.5 102 33.3
Lj8A304T44 Lonicera japonica HOM05D001781 ORTHO05D001711 8.5e-07 58.5 104 36.5
unitig_899.g15345 Utricularia gibba HOM05D005016 ORTHO05D005740 8.5e-07 58.5 91 35.2
CsaV3_3G049030 Cucumis sativus L. HOM05D001781 ORTHO05D001711 1.1e-06 58.2 103 34.0
Dinv36549 Davidia involucrata HOM05D001781 ORTHO05D001711 1.1e-06 58.2 115 31.3
Migut.B01754 Erythranthe guttata HOM05D001781 ORTHO05D001711 1.1e-06 58.2 109 33.9
Manes.17G014200 Manihot esculenta HOM05D001781 ORTHO05D001711 1.1e-06 58.2 100 33.0
PSO170G3589 Papaver somniferum HOM05D001781 ORTHO05D001711 1.1e-06 58.2 95 32.6
Peaxi162Scf00815g00352 Petunia axillaris HOM05D001781 ORTHO05D001711 1.1e-06 58.2 116 32.8
Zm00001eb415660 Zea mays HOM05D001781 ORTHO05D001711 1.1e-06 58.2 109 32.1
CANSAT11G0594 Cannabis sativa HOM05D001781 ORTHO05D001711 1.5e-06 57.8 90 34.4
DCAR_024960 Daucus carota HOM05D001781 ORTHO05D001711 1.5e-06 57.8 102 34.3
Nitab4.5_0005968g0060 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.5e-06 57.8 108 33.3
PGR044G0682 Punica granatum HOM05D001781 ORTHO05D001711 1.5e-06 57.8 255 23.1
Sed0025142 Sechium edule HOM05D001781 ORTHO05D001711 1.5e-06 57.8 102 33.3
Actinidia03365 Actinidia chinensis HOM05D001781 ORTHO05D001711 1.9e-06 57.4 102 33.3
Cre11.g476200 Chlamydomonas reinhardtii HOM05D001781 ORTHO05D001711 1.9e-06 57.4 102 30.4
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 1.9e-06 57.4 90 35.6
Migut.N01445 Erythranthe guttata HOM05D001781 ORTHO05D001711 1.9e-06 57.4 99 36.4
HanXRQChr17g0536161 Helianthus annuus HOM05D001781 ORTHO05D001711 1.9e-06 57.4 99 33.3
MD17G1204700 Malus domestica HOM05D001781 ORTHO05D001711 1.9e-06 57.4 91 36.3
Nitab4.5_0000645g0100 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.9e-06 57.4 127 32.3
Solyc06g072720.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 1.9e-06 57.4 104 36.5
Sopen06g029090 Solanum pennellii HOM05D001781 ORTHO05D001711 1.9e-06 57.4 104 36.5
PGSC0003DMG400026937 Solanum tuberosum HOM05D001781 ORTHO05D001711 1.9e-06 57.4 104 36.5
SGA_v2.0_scaffold43G16415 Striga asiatica HOM05D001781 ORTHO05D001711 1.9e-06 57.4 103 35.0
TAR636G2048 Trochodendron aralioides HOM05D001781 ORTHO05D001711 1.9e-06 57.4 97 32.0
Aa31LG8G6110 Aethionema arabicum HOM05D001781 ORTHO05D001711 2.5e-06 57.0 109 33.9
MSTRG.26142 Avicennia marina HOM05D001781 ORTHO05D001711 2.5e-06 57.0 90 33.3
CAN.G1131.35 Capsicum annuum HOM05D001781 ORTHO05D001711 2.5e-06 57.0 104 32.7
MELO3C003423.2 Cucumis melo HOM05D001781 ORTHO05D001711 2.5e-06 57.0 102 33.3
FAN05G2755 Fragaria x ananassa HOM05D025868 ORTHO05D001711 2.5e-06 57.0 92 35.9
HanXRQChr06g0180231 Helianthus annuus HOM05D001781 ORTHO05D001711 2.5e-06 57.0 107 29.9
Lalb_Chr05g0215931 Lupinus albus HOM05D001781 ORTHO05D001711 2.5e-06 57.0 98 32.7
Nitab4.5_0002998g0030 Nicotiana tabacum HOM05D001781 ORTHO05D001711 2.5e-06 57.0 129 34.9
Oeu006925.1 Olea europaea HOM05D001781 ORTHO05D001711 2.5e-06 57.0 90 35.6
Peaxi162Scf00591g00511 Petunia axillaris HOM05D001781 ORTHO05D001711 2.5e-06 57.0 94 35.1
SalBow3G3711 Salvia bowleyana HOM05D001781 ORTHO05D001711 2.5e-06 57.0 99 35.4
SEGI_17821 Sequoiadendron giganteum HOM05D001781 ORTHO05D001711 2.5e-06 57.0 95 36.8
VMungo0251G2200 Vigna mungo HOM05D001781 ORTHO05D001711 2.5e-06 57.0 103 34.0
Carub.0004s1711 Capsella rubella HOM05D001781 ORTHO05D001711 3.2e-06 56.6 119 35.3
CAN.G65.125 Capsicum annuum HOM05D001781 ORTHO05D001711 3.2e-06 56.6 103 35.9
DCAR_004290 Daucus carota HOM05D001781 ORTHO05D001711 3.2e-06 56.6 101 32.7
FvH4_6g30290 Fragaria vesca HOM05D025868 ORTHO05D001711 3.2e-06 56.6 92 34.8
Lj4A461T9 Lonicera japonica HOM05D001781 ORTHO05D001711 3.2e-06 56.6 92 32.6
Rhsim01G0076800 Rhododendron simsii HOM05D001781 ORTHO05D001711 3.2e-06 56.6 110 30.9
Solyc11g070070.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 3.2e-06 56.6 103 35.9
Sopen11g028750 Solanum pennellii HOM05D001781 ORTHO05D001711 3.2e-06 56.6 103 35.9
PGSC0003DMG400025515 Solanum tuberosum HOM05D001781 ORTHO05D001711 3.2e-06 56.6 103 35.9
THA.LOC104812754 Tarenaya hassleriana HOM05D001781 ORTHO05D001711 3.2e-06 56.6 137 29.2
A05p24960 Brassica napus HOM05D001781 ORTHO05D001711 4.2e-06 56.2 98 34.7
BraA05t21379Z Brassica rapa HOM05D001781 ORTHO05D001711 4.2e-06 56.2 132 31.1
CSS0022836 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 105 35.2
CSS0038934 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 105 35.2
CiPaw.11G095400 Carya illinoinensis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 103 31.1
CiPaw.12G065100 Carya illinoinensis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 103 32.0
Eucgr.C04180 Eucalyptus grandis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 111 30.6
Psat4g040320 Pisum sativum HOM05D001781 ORTHO05D001711 4.2e-06 56.2 110 28.2
Psat4g041760 Pisum sativum HOM05D001781 ORTHO05D001711 4.2e-06 56.2 148 27.7
Sabra09G0101100 Salix brachista HOM05D001781 ORTHO05D001711 4.2e-06 56.2 93 32.3
Sc18g0000720 Simmondsia chinensis HOM05D001781 ORTHO05D001711 4.2e-06 56.2 128 28.1
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 4.2e-06 56.2 90 35.6
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 4.2e-06 56.2 127 31.5
Actinidia22004 Actinidia chinensis HOM05D001781 ORTHO05D001711 5.5e-06 55.8 106 34.0
BcaB07g32919 Brassica carinata HOM05D001781 ORTHO05D001711 5.5e-06 55.8 137 31.4
Cpa.g.sc90.64 Carica papaya HOM05D001781 ORTHO05D001711 5.5e-06 55.8 109 32.1
Glyma.01G095100 Glycine max HOM05D001781 ORTHO05D001711 5.5e-06 55.8 104 32.7
Gohir.A07G034784 Gossypium hirsutum HOM05D001781 ORTHO05D001711 5.5e-06 55.8 90 34.4
Gohir.D07G038700 Gossypium hirsutum HOM05D001781 ORTHO05D001711 5.5e-06 55.8 90 34.4
Gorai.001G040700 Gossypium raimondii HOM05D001781 ORTHO05D001711 5.5e-06 55.8 90 34.4
Phvul.003G162600 Phaseolus vulgaris HOM05D001781 ORTHO05D001711 5.5e-06 55.8 109 30.3
Phvul.003G284200 Phaseolus vulgaris HOM05D001781 ORTHO05D001711 5.5e-06 55.8 103 34.0
Potri.003G093600 Populus trichocarpa HOM05D001781 ORTHO05D001711 5.5e-06 55.8 102 36.3
TWI15G0233 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 5.5e-06 55.8 97 35.1
Atru.chr6.1653 Acer truncatum HOM05D001781 ORTHO05D001711 7.2e-06 55.5 141 30.5
Actinidia40455 Actinidia chinensis HOM05D001781 ORTHO05D001711 7.2e-06 55.5 106 33.0
Cpa.g.c41482 Carica papaya HOM05D001781 ORTHO05D001711 7.2e-06 55.5 90 35.6
Cpa.g.sc75.57 Carica papaya HOM05D001781 ORTHO05D001711 7.2e-06 55.5 90 35.6
Ciclev10015789m.g Citrus clementina HOM05D001781 ORTHO05D001711 7.2e-06 55.5 103 32.0
Haze_25615 Corylus avellana HOM05D001781 ORTHO05D001711 7.2e-06 55.5 106 30.2
Glyma.08G270701 Glycine max HOM05D001781 ORTHO05D001711 7.2e-06 55.5 107 33.6
Nitab4.5_0004188g0030 Nicotiana tabacum HOM05D001781 ORTHO05D001711 7.2e-06 55.5 90 35.6
Nitab4.5_0005411g0020 Nicotiana tabacum HOM05D001781 ORTHO05D001711 7.2e-06 55.5 90 35.6
PSO455G0032 Papaver somniferum HOM05D001781 ORTHO05D001711 7.2e-06 55.5 95 31.6
VMungo1215G1152 Vigna mungo HOM05D001781 ORTHO05D001711 7.2e-06 55.5 90 32.2
Ah.14g080640 Amaranthus hybridus HOM05D001781 ORTHO05D001711 9.4e-06 55.1 132 31.1
AL3G32760 Arabidopsis lyrata HOM05D001781 ORTHO05D001711 9.4e-06 55.1 210 25.7
Ca_02433_v3 Cicer arietinum L. HOM05D001781 ORTHO05D001711 9.4e-06 55.1 106 32.1
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 9.4e-06 55.1 90 34.4
Sabra03G0062800 Salix brachista HOM05D001781 ORTHO05D001711 9.4e-06 55.1 102 35.3


User provided reference genes

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