Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb335080 Zea mays HOM05D004693 ORTHO05D005545 2.5e-136 488.8 252 100.0
Zm00001eb125470 Zea mays HOM05D004693 ORTHO05D005545 1.1e-102 377.1 253 81.4
Os01g0128300 Oryza sativa ssp. japonica HOM05D004693 ORTHO05D005545 8.2e-79 297.7 237 72.2
TAR629G3320 Trochodendron aralioides HOM05D004693 ORTHO05D005545 5.7e-64 248.4 151 78.8
Thecc.04G133900 Theobroma cacao HOM05D004693 ORTHO05D005545 1.8e-62 243.4 150 76.7
Peaxi162Scf00501g00318 Petunia axillaris HOM05D004693 ORTHO05D005545 2.0e-61 240.0 150 74.7
Prupe.5G053500 Prunus persica HOM05D004693 ORTHO05D005545 7.7e-61 238.0 149 75.2
Actinidia15883 Actinidia chinensis HOM05D004693 ORTHO05D005545 1.0e-60 237.7 176 67.6
Lj2A442G45 Lonicera japonica HOM05D004693 ORTHO05D005545 1.0e-60 237.7 143 78.3
Manes.02G068600 Manihot esculenta HOM05D004693 ORTHO05D005545 1.0e-60 237.7 143 78.3
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla HOM05D004693 ORTHO05D005545 2.2e-60 236.5 148 75.0
RcHm_v2.0_Chr7g0206351 Rosa chinensis HOM05D004693 ORTHO05D005545 2.2e-60 236.5 150 72.7
Hund13716 Selenicereus undatus HOM05D004693 ORTHO05D005545 2.2e-60 236.5 152 74.3
Atru.chr1.1699 Acer truncatum HOM05D004693 ORTHO05D005545 2.9e-60 236.1 151 72.8
Migut.L00317 Erythranthe guttata HOM05D004693 ORTHO05D005545 2.9e-60 236.1 148 76.4
Dinv33946 Davidia involucrata HOM05D004693 ORTHO05D005545 3.8e-60 235.7 143 75.5
TWI77G0167 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 5.0e-60 235.3 149 74.5
Oeu010266.2 Olea europaea HOM05D004693 ORTHO05D005545 6.5e-60 235.0 174 67.2
GSVIVG01031023001 Vitis vinifera HOM05D004693 ORTHO05D005545 6.5e-60 235.0 148 73.6
Nn4g23871 Nelumbo nucifera HOM05D004693 ORTHO05D005545 8.5e-60 234.6 147 76.2
Potri.004G099500 Populus trichocarpa HOM05D004693 ORTHO05D005545 8.5e-60 234.6 148 73.0
vmacro05556 Vaccinium macrocarpon HOM05D004693 ORTHO05D005545 8.5e-60 234.6 169 69.8
ATR1125G077 Amborella trichopoda HOM05D004693 ORTHO05D005545 1.1e-59 234.2 143 74.8
CAN.G225.4 Capsicum annuum HOM05D004693 ORTHO05D005545 1.1e-59 234.2 146 74.0
QL02p051402 Quercus lobata HOM05D004693 ORTHO05D005545 1.4e-59 233.8 144 77.1
DCAR_025914 Daucus carota HOM05D004693 ORTHO05D005545 1.9e-59 233.4 143 76.2
Nitab4.5_0001217g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.9e-59 233.4 149 73.2
PSO478G2919 Papaver somniferum HOM05D004693 ORTHO05D005545 1.9e-59 233.4 147 75.5
Solyc02g063170.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.9e-59 233.4 144 75.0
Actinidia36320 Actinidia chinensis HOM05D004693 ORTHO05D005545 2.5e-59 233.0 166 68.7
MSTRG.23575 Avicennia marina HOM05D004693 ORTHO05D005545 3.2e-59 232.6 143 77.6
TAR371G1203 Trochodendron aralioides HOM05D004693 ORTHO05D005545 3.2e-59 232.6 147 76.2
Nn3g17869 Nelumbo nucifera HOM05D004693 ORTHO05D005545 4.2e-59 232.3 145 77.2
PGSC0003DMG400024184 Solanum tuberosum HOM05D004693 ORTHO05D005545 4.2e-59 232.3 144 75.0
Sopen02g014240 Solanum pennellii HOM05D004693 ORTHO05D005545 7.2e-59 231.5 144 75.0
FvH4_5g20670 Fragaria vesca HOM05D004693 ORTHO05D005545 9.4e-59 231.1 150 71.3
SalBow3G4509 Salvia bowleyana HOM05D004693 ORTHO05D005545 9.4e-59 231.1 150 72.7
Sopen02g030740 Solanum pennellii HOM05D004693 ORTHO05D005545 9.4e-59 231.1 157 69.4
Ciclev10012575m.g Citrus clementina HOM05D004693 ORTHO05D005545 1.2e-58 230.7 139 77.7
PSO017G3734 Papaver somniferum HOM05D004693 ORTHO05D005545 1.2e-58 230.7 140 77.9
SGA_v2.0_scaffold115G32108 Striga asiatica HOM05D000286 ORTHO05D000170 1.2e-58 230.7 143 76.2
Migut.H00217 Erythranthe guttata HOM05D004693 ORTHO05D005545 1.6e-58 230.3 162 71.0
Gohir.A12G053800 Gossypium hirsutum HOM05D004693 ORTHO05D005545 1.6e-58 230.3 147 74.1
Gorai.008G055600 Gossypium raimondii HOM05D004693 ORTHO05D005545 1.6e-58 230.3 147 74.1
Nitab4.5_0004398g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.1e-58 229.9 151 71.5
Sed0027829 Sechium edule HOM05D004693 ORTHO05D005545 2.1e-58 229.9 148 71.6
CsaV3_3G020700 Cucumis sativus L. HOM05D004693 ORTHO05D005545 2.7e-58 229.6 148 70.3
FAN13G1234 Fragaria x ananassa HOM05D004693 ORTHO05D005545 2.7e-58 229.6 150 70.7
Gohir.D12G052500 Gossypium hirsutum HOM05D004693 ORTHO05D005545 2.7e-58 229.6 147 74.1
MSTRG.15294 Avicennia marina HOM05D004693 ORTHO05D005545 3.6e-58 229.2 150 72.0
AUR62023302 Chenopodium quinoa HOM05D004693 ORTHO05D005545 3.6e-58 229.2 146 74.0
AL2G25440 Arabidopsis lyrata HOM05D004693 ORTHO05D005545 4.7e-58 228.8 149 73.8
AUR62009000 Chenopodium quinoa HOM05D004693 ORTHO05D005545 4.7e-58 228.8 146 73.3
ClCG05G011670 Citrullus lanatus HOM05D004693 ORTHO05D005545 4.7e-58 228.8 148 71.6
PGSC0003DMG401026407 Solanum tuberosum HOM05D004693 ORTHO05D005545 4.7e-58 228.8 157 70.1
BcaB05g24236 Brassica carinata HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
BcaC03g14797 Brassica carinata HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
A02p13930 Brassica napus HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
C02p22440 Brassica napus HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
BolC2t08398H Brassica oleracea HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
BraA02t06454Z Brassica rapa HOM05D004693 ORTHO05D005545 6.1e-58 228.4 147 75.5
Nitab4.5_0000912g0240 Nicotiana tabacum HOM05D004693 ORTHO05D005545 6.1e-58 228.4 150 72.0
COL.COLO4_09328 Corchorus olitorius HOM05D004693 ORTHO05D005545 1.0e-57 227.6 141 75.2
Sabra17G0095200 Salix brachista HOM05D004693 ORTHO05D005545 1.0e-57 227.6 150 70.0
Eucgr.F02496 Eucalyptus grandis HOM05D004693 ORTHO05D005545 1.4e-57 227.3 144 74.3
HanXRQChr12g0376541 Helianthus annuus HOM05D004693 ORTHO05D005545 1.4e-57 227.3 140 76.4
SalBow5G5330 Salvia bowleyana HOM05D004693 ORTHO05D005545 1.4e-57 227.3 150 75.3
Solyc02g086050.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.4e-57 227.3 150 70.7
TWI53G0853 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 1.4e-57 227.3 149 71.8
VMungo1383G0350 Vigna mungo HOM05D004693 ORTHO05D005545 1.4e-57 227.3 144 74.3
MD00G1132400 Malus domestica HOM05D004693 ORTHO05D005545 2.3e-57 226.5 150 72.0
MD06G1045700 Malus domestica HOM05D004693 ORTHO05D005545 2.3e-57 226.5 150 72.7
Nitab4.5_0000659g0050 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.3e-57 226.5 150 71.3
PGR004G1354 Punica granatum HOM05D004693 ORTHO05D005545 2.3e-57 226.5 143 74.1
Ah.16g101760 Amaranthus hybridus HOM05D004693 ORTHO05D005545 3.0e-57 226.1 144 73.6
Carub.0002s1337 Capsella rubella HOM05D004693 ORTHO05D005545 3.0e-57 226.1 145 75.9
Thhalv10019078m.g Eutrema salsugineum HOM05D004693 ORTHO05D005545 3.0e-57 226.1 146 74.7
Sp5g22010 Schrenkiella parvula HOM05D004693 ORTHO05D005545 3.0e-57 226.1 147 74.8
THA.LOC104805567 Tarenaya hassleriana HOM05D004693 ORTHO05D005545 3.0e-57 226.1 147 71.4
CARHR059530 Cardamine hirsuta HOM05D004693 ORTHO05D005545 3.9e-57 225.7 145 76.6
Lsat_1_v5_gn_3_79761 Lactuca sativa HOM05D004693 ORTHO05D005545 3.9e-57 225.7 139 74.8
Cc07_g08830 Coffea canephora HOM05D004693 ORTHO05D005545 8.8e-57 224.6 143 73.4
AT1G67080 Arabidopsis thaliana HOM05D004693 ORTHO05D005545 1.1e-56 224.2 143 74.8
Phvul.008G005900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 1.1e-56 224.2 144 74.3
DCAR_017191 Daucus carota HOM05D004693 ORTHO05D005545 1.5e-56 223.8 142 73.2
Phvul.007G143200 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 2.0e-56 223.4 144 75.0
CAN.G625.24 Capsicum annuum HOM05D004693 ORTHO05D005545 4.4e-56 222.2 177 62.1
ECA246G3075 Erigeron canadensis HOM05D004693 ORTHO05D005545 4.4e-56 222.2 149 69.1
CANSAT78G0919 Cannabis sativa HOM05D004693 ORTHO05D005545 7.4e-56 221.5 179 63.1
Glyma.08G365700 Glycine max HOM05D004693 ORTHO05D005545 1.3e-55 220.7 144 71.5
Sed0024744 Sechium edule HOM05D004693 ORTHO05D005545 2.8e-55 219.5 143 70.6
unitig_748.g8751 Utricularia gibba HOM05D004693 ORTHO05D005545 3.7e-55 219.2 146 69.2
Aa31LG2G3480 Aethionema arabicum HOM05D004693 ORTHO05D005545 4.8e-55 218.8 142 73.2
Sabra04G0080500 Salix brachista HOM05D004693 ORTHO05D005545 6.3e-55 218.4 174 62.6
unitig_32.g11889 Utricularia gibba HOM05D004693 ORTHO05D005545 1.1e-54 217.6 171 61.4
MD09G1253000 Malus domestica HOM05D004693 ORTHO05D005545 1.4e-54 217.2 148 70.3
Prupe.3G157500 Prunus persica HOM05D004693 ORTHO05D005545 1.4e-54 217.2 152 69.7
Glyma.18G296600 Glycine max HOM05D004693 ORTHO05D005545 1.8e-54 216.9 144 70.8
Medtr6g025680 Medicago truncatula HOM05D004693 ORTHO05D005545 3.1e-54 216.1 145 69.0
Medtr6g018550 Medicago truncatula HOM05D004693 ORTHO05D005545 9.1e-54 214.5 145 68.3
SEGI_37456 Sequoiadendron giganteum HOM05D004693 ORTHO05D005545 1.2e-53 214.2 148 66.9
HPP92_021861 Vanilla planifolia HOM05D004693 ORTHO05D005545 1.2e-53 214.2 145 69.0
Lalb_Chr21g0317811 Lupinus albus HOM05D004693 ORTHO05D005545 5.9e-53 211.8 143 68.5
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea HOM05D004693 ORTHO05D005545 1.7e-52 210.3 140 70.0
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea HOM05D004693 ORTHO05D005545 1.7e-52 210.3 140 70.0
TPR.G32451 Trifolium pratense HOM05D004693 ORTHO05D005545 2.2e-52 209.9 145 65.5
Glyma.19G047800 Glycine max HOM05D004693 ORTHO05D005545 2.9e-52 209.5 150 65.3
Lj2g0008970 Lotus japonicus HOM05D004693 ORTHO05D005545 6.5e-52 208.4 139 69.8
Medtr7g007280 Medicago truncatula HOM05D004693 ORTHO05D005545 1.1e-51 207.6 140 70.0
Lj1g0002546 Lotus japonicus HOM05D004693 ORTHO05D005545 1.9e-51 206.8 139 68.3
Sed0014747 Sechium edule HOM05D004693 ORTHO05D005545 1.9e-51 206.8 143 64.3
Potri.017G114900 Populus trichocarpa HOM05D004693 ORTHO05D005545 7.2e-51 204.9 150 67.3
Ca_04048_v3 Cicer arietinum L. HOM05D004693 ORTHO05D005545 9.4e-51 204.5 139 69.1
Lalb_Chr17g0335881 Lupinus albus HOM05D004693 ORTHO05D005545 4.7e-50 202.2 145 64.1
Psat3g205360 Pisum sativum HOM05D004693 ORTHO05D005545 8.0e-50 201.4 140 67.1
MELO3C023805.2 Cucumis melo HOM05D004693 ORTHO05D005545 1.4e-49 200.7 124 71.8
TPR.G9726 Trifolium pratense HOM05D004693 ORTHO05D005545 1.4e-49 200.7 140 65.7
Pp3c12_21540 Physcomitrium patens HOM05D004693 ORTHO05D005545 6.3e-47 191.8 182 53.3
Solyc03g034240.4 Solanum lycopersicum HOM05D004693 ORTHO05D005545 6.3e-47 191.8 156 59.6
Nitab4.5_0002207g0070 Nicotiana tabacum HOM05D004693 ORTHO05D005545 8.3e-47 191.4 129 66.7
PGSC0003DMG402019589 Solanum tuberosum HOM05D004693 ORTHO05D005545 1.1e-46 191.0 144 60.4
Sopen03g007020 Solanum pennellii HOM05D004693 ORTHO05D005545 1.8e-46 190.3 164 57.3
EL10Ac2g04567 Beta vulgaris HOM05D004693 ORTHO05D005545 2.4e-46 189.9 143 65.7
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis HOM05D004693 ORTHO05D005545 1.2e-45 187.6 137 63.5
SMO356G0314 Selaginella moellendorffii HOM05D004693 ORTHO05D005545 2.7e-45 186.4 142 59.2
Eucgr.F02495 Eucalyptus grandis HOM05D004693 ORTHO05D005545 7.7e-45 184.9 138 63.8
Mapoly0134s0007 Marchantia polymorpha HOM05D004693 ORTHO05D005545 8.5e-44 181.4 139 60.4
Pp3c3_37490 Physcomitrium patens HOM05D004693 ORTHO05D005545 2.5e-43 179.9 195 49.2
Peaxi162Scf00394g00618 Petunia axillaris HOM05D004693 ORTHO05D005545 7.2e-43 178.3 150 60.0
Aqoxy3G00271 Aquilegia oxysepala HOM05D004693 ORTHO05D005545 1.3e-39 167.5 106 75.5
SGA_v2.0_scaffold33G13498 Striga asiatica HOM05D004693 ORTHO05D005545 1.3e-39 167.5 126 68.3
HPP92_000177 Vanilla planifolia HOM05D004693 ORTHO05D005545 7.0e-38 161.8 129 63.6
Psat1g081400 Pisum sativum HOM05D004693 ORTHO05D005545 2.3e-36 156.8 117 63.2
HanXRQChr15g0471501 Helianthus annuus HOM05D004693 ORTHO05D005545 2.9e-36 156.4 102 71.6
VMungo0464G1881 Vigna mungo HOM05D004693 ORTHO05D005545 6.1e-34 148.7 105 66.7
Duzib133G0419 Durio zibethinus HOM05D004693 ORTHO05D005545 2.0e-32 143.7 150 51.3
CiPaw.04G042100 Carya illinoinensis HOM05D000286 ORTHO05D000170 3.7e-31 139.4 143 51.7
CDE12G0456 Ceratophyllum demersum HOM05D001541 ORTHO05D001465 3.2e-30 136.3 138 54.3
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 7.0e-30 135.2 148 49.3
Peaxi162Scf00205g00220 Petunia axillaris HOM05D004693 ORTHO05D005545 2.9e-28 129.8 126 50.8
Cpa.g.sc282.10 Carica papaya HOM05D004693 ORTHO05D005545 6.8e-25 118.6 77 74.0
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis HOM05D004693 ORTHO05D005545 2.2e-23 113.6 79 67.1
MD06G1045600 Malus domestica HOM05D004693 ORTHO05D005545 2.2e-23 113.6 157 45.9
Nitab4.5_0002207g0120 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.4e-22 110.9 150 40.0
PRCOL_00000715 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 8.0e-18 95.1 188 34.6
MCO01G364 Micromonas commoda HOM05D004693 ORTHO05D005545 1.8e-17 94.0 152 34.9
Phvul.004G065900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 2.0e-16 90.5 76 60.5
Cre06.g255300 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 1.6e-13 80.9 155 30.3
Cre03.g207000 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 6.0e-13 79.0 146 35.6
PRCOL_00005350 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.1e-11 74.7 122 32.0
VMungo0251G1321 Vigna mungo HOM05D000154 ORTHO05D000092 8.1e-10 68.6 83 47.0
PRCOL_00000440 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 4.0e-09 66.2 152 30.9


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