Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 4.0e-199 698.0 375 100.0
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 9.1e-151 537.3 353 83.3
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 4.8e-99 365.5 375 57.6
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 9.1e-42 175.3 226 40.3
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.6e-41 174.5 225 37.3
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 2.0e-41 174.1 265 39.2
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.0e-40 171.8 393 34.4
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.2e-40 170.6 393 33.8
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.9e-40 170.2 374 32.4
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 3.8e-40 169.9 225 37.3
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 5.0e-40 169.5 393 34.1
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 6.5e-40 169.1 393 34.1
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 6.5e-40 169.1 400 34.2
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 8.5e-40 168.7 226 39.4
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.1e-39 168.3 226 38.9
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.1e-39 168.3 226 38.9
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.9e-39 167.5 262 37.0
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 9.4e-39 165.2 260 37.3
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 1.2e-38 164.9 259 34.4
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.0e-37 161.8 369 34.1
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 1.4e-37 161.4 259 34.4
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 2.3e-37 160.6 260 35.4
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.3e-37 160.6 375 32.5
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.0e-37 160.2 226 35.0
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 3.0e-37 160.2 226 36.3
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 5.2e-37 159.5 259 37.1
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 5.2e-37 159.5 227 38.3
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 6.8e-37 159.1 260 35.4
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.0e-36 157.5 226 34.5
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.0e-36 157.5 224 37.9
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 2.6e-36 157.1 259 35.1
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 2.6e-36 157.1 227 36.1
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 3.4e-36 156.8 227 35.7
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.5e-36 155.6 388 31.7
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 9.8e-36 155.2 225 34.7
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.7e-35 154.5 228 36.0
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.2e-35 154.1 397 31.5
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 2.8e-35 153.7 393 31.0
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 3.7e-35 153.3 260 33.8
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 3.7e-35 153.3 395 30.1
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 4.8e-35 152.9 260 32.7
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 6.3e-35 152.5 388 29.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 6.3e-35 152.5 393 30.8
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 6.3e-35 152.5 392 29.6
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 8.3e-35 152.1 271 34.3
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 1.1e-34 151.8 226 36.3
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.1e-34 151.8 392 31.6
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-34 151.8 393 30.5
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 1.4e-34 151.4 260 32.3
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 1.4e-34 151.4 225 37.3
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.8e-34 151.0 401 31.7
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 2.4e-34 150.6 222 35.1
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 2.4e-34 150.6 388 29.4
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 2.4e-34 150.6 260 31.2
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 2.4e-34 150.6 270 33.7
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.4e-34 150.6 260 34.6
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 3.1e-34 150.2 227 34.4
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 3.1e-34 150.2 392 31.1
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 4.1e-34 149.8 226 34.5
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 4.1e-34 149.8 226 35.0
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 4.1e-34 149.8 247 35.6
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 4.1e-34 149.8 232 37.1
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 4.1e-34 149.8 270 34.1
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 5.4e-34 149.4 270 34.1
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 5.4e-34 149.4 226 35.0
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 7.0e-34 149.1 394 31.0
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 7.0e-34 149.1 392 30.4
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 9.1e-34 148.7 246 34.6
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.2e-33 148.3 243 34.2
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.2e-33 148.3 393 31.8
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.6e-33 147.9 375 30.1
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 2.7e-33 147.1 389 31.9
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 3.5e-33 146.7 390 29.5
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 3.5e-33 146.7 393 28.5
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 5.9e-33 146.0 384 28.1
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 7.7e-33 145.6 211 36.5
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 7.7e-33 145.6 378 30.4
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 1.0e-32 145.2 392 29.3
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.3e-32 144.8 393 29.5
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.3e-32 144.8 360 30.8
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 2.9e-32 143.7 383 31.3
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 2.9e-32 143.7 225 35.1
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.9e-32 143.7 397 31.0
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 3.8e-32 143.3 286 31.8
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 3.8e-32 143.3 352 30.4
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.8e-32 143.3 383 29.2
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 5.0e-32 142.9 384 28.4
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 5.0e-32 142.9 384 28.4
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 6.5e-32 142.5 392 29.6
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 6.5e-32 142.5 374 29.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 8.5e-32 142.1 259 33.2
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 1.1e-31 141.7 214 36.0
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.9e-31 141.0 396 29.3
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 2.5e-31 140.6 221 35.7
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 3.2e-31 140.2 247 34.0
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 4.2e-31 139.8 392 28.3
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 7.2e-31 139.0 393 29.0
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 9.4e-31 138.7 392 29.6
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 9.4e-31 138.7 387 28.4
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 2.7e-30 137.1 220 36.4
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 3.6e-30 136.7 398 28.1
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 3.6e-30 136.7 392 30.1
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 4.7e-30 136.3 392 27.3
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 8.0e-30 135.6 400 28.2
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.0e-29 135.2 391 28.1
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.8e-29 134.4 259 32.0
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 2.3e-29 134.0 392 28.8
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.5e-28 131.3 371 28.8
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 1.3e-27 128.3 178 34.8
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 6.3e-27 125.9 378 29.1
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 6.3e-27 125.9 259 30.1
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 4.5e-25 119.8 393 28.0
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 6.1e-22 109.4 299 29.1
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 2.9e-16 90.5 229 27.1
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 3.9e-16 90.1 321 28.3
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 5.0e-16 89.7 227 27.3
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 5.0e-16 89.7 395 24.8
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 6.2e-14 82.8 317 27.4
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 5.4e-10 69.7 253 26.9
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 9.2e-10 68.9 176 29.5
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 6.0e-09 66.2 273 22.3
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 9.5e-07 58.9 118 34.7


User provided reference genes

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