Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.6e-171 605.9 288 100.0
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 3.0e-125 452.2 214 99.1
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.0e-109 400.6 214 86.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 2.5e-92 342.8 217 68.2
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 4.3e-92 342.0 214 68.7
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 5.6e-92 341.7 214 69.2
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.3e-91 340.5 214 69.2
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 2.1e-91 339.7 214 68.2
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.8e-90 336.7 214 68.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 3.1e-90 335.9 214 68.2
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 4.0e-90 335.5 214 68.2
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.3e-90 335.1 214 68.2
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.2e-89 334.0 214 67.8
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.2e-89 334.0 214 67.8
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.0e-89 333.2 214 66.8
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 2.6e-89 332.8 214 68.2
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.6e-89 332.8 218 66.1
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 3.4e-89 332.4 214 67.8
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 3.4e-89 332.4 214 67.3
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 4.5e-89 332.0 214 66.4
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 4.5e-89 332.0 214 68.2
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 5.8e-89 331.6 213 67.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 7.6e-89 331.3 219 65.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 7.6e-89 331.3 214 66.8
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 7.6e-89 331.3 214 67.8
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.0e-88 330.9 217 67.7
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.3e-88 330.5 231 62.8
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.7e-88 330.1 219 66.2
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.7e-88 330.1 211 67.3
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.2e-88 329.7 214 67.8
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 2.2e-88 329.7 213 64.8
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.9e-88 329.3 219 65.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.9e-88 329.3 214 65.9
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 2.9e-88 329.3 219 65.8
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.9e-88 328.6 214 67.8
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 4.9e-88 328.6 214 67.8
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 6.5e-88 328.2 220 64.5
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.5e-88 328.2 214 65.4
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.9e-87 326.6 214 64.5
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.2e-87 325.9 225 63.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 3.2e-87 325.9 214 67.8
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 4.2e-87 325.5 214 65.9
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 7.1e-87 324.7 214 65.4
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-86 323.9 214 67.8
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.6e-86 323.6 220 63.6
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.1e-86 323.2 219 64.8
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 3.5e-86 322.4 219 63.9
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.0e-86 321.6 214 65.9
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 7.9e-86 321.2 214 65.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.3e-85 319.7 213 64.3
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.0e-85 319.3 214 65.0
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 3.0e-85 319.3 214 64.0
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 3.0e-85 319.3 219 63.5
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.9e-85 318.9 219 62.6
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 3.9e-85 318.9 214 63.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.9e-85 318.9 214 63.6
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 5.1e-85 318.5 213 64.8
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 8.7e-85 317.8 213 64.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.1e-84 317.4 214 64.0
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.1e-84 317.4 219 63.0
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.5e-84 316.2 213 65.7
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 4.3e-84 315.5 219 63.0
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 5.7e-84 315.1 214 62.1
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.4e-84 314.7 219 63.0
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.6e-83 313.5 219 63.9
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.8e-83 312.8 195 68.7
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 2.8e-83 312.8 148 100.0
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.3e-83 311.6 200 66.0
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.4e-82 310.5 219 61.6
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.8e-82 310.1 214 64.5
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.8e-82 310.1 225 61.3
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 4.1e-82 308.9 213 64.3
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 5.3e-82 308.5 219 63.0
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 9.0e-82 307.8 213 62.9
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 9.0e-82 307.8 225 60.9
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 9.0e-82 307.8 213 61.5
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.2e-81 307.4 213 62.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-81 307.4 225 60.9
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.2e-81 307.4 225 60.9
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.2e-81 307.4 219 60.7
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 1.5e-81 307.0 213 62.4
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.4e-81 305.8 220 61.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 4.2e-79 298.9 214 59.8
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 7.2e-79 298.1 214 59.8
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.6e-78 297.0 214 61.7
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.6e-78 297.0 214 60.7
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.1e-78 296.6 215 60.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 3.6e-78 295.8 214 61.2
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 4.6e-78 295.4 214 58.9
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 4.6e-78 295.4 214 58.9
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 4.6e-78 295.4 215 58.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 7.9e-78 294.7 214 59.3
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.3e-77 293.9 214 60.3
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 6.7e-77 291.6 225 57.3
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 6.7e-77 291.6 214 61.7
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.1e-76 290.8 225 57.3
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.5e-76 290.4 214 57.9
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.5e-76 290.4 214 57.9
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.5e-76 290.4 214 57.9
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.2e-75 286.6 225 56.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 4.8e-75 285.4 244 53.3
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 5.3e-74 282.0 236 53.8
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.4e-66 257.3 178 68.0
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.4e-58 229.9 152 65.1
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 5.3e-50 202.2 132 65.2
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 3.4e-44 183.0 128 60.9
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 5.4e-42 175.6 120 62.5
Zm00001eb219060 Zea mays HOM05D000283 ORTHO05D000358 9.8e-36 154.8 75 98.7
Zm00001eb370250 Zea mays HOM05D000283 ORTHO05D000358 9.2e-34 148.3 73 97.3
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 7.8e-17 92.0 101 47.5
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.9e-16 89.7 212 29.2
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.7e-11 74.3 51 64.7
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 7.3e-07 58.9 78 38.5


User provided reference genes

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