Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb333370 Zea mays HOM05D007826 ORTHO05D000867 1.1e-102 376.7 205 100.0
Zm00001eb218250 Zea mays HOM05D001055 ORTHO05D000867 1.9e-25 120.2 98 84.7
Zm00001eb110390 Zea mays HOM05D007826 ORTHO05D009921 4.0e-23 112.5 62 90.3
Os07g0644600 Oryza sativa ssp. japonica HOM05D007826 ORTHO05D009921 8.8e-15 84.7 62 74.2
Zm00001eb056850 Zea mays HOM05D001691 ORTHO05D001704 2.2e-13 80.1 41 90.2
Zm00001eb052700 Zea mays HOM05D001055 ORTHO05D000867 3.3e-09 66.2 113 52.2
TAR636G3365 Trochodendron aralioides HOM05D007826 ORTHO05D009921 1.2e-06 57.8 44 59.1
Os03g0656500 Oryza sativa ssp. japonica HOM05D001055 ORTHO05D000867 1.5e-06 57.4 106 46.2
RcHm_v2.0_Chr1g0328201 Rosa chinensis HOM05D007826 ORTHO05D009921 2.0e-06 57.0 51 54.9
PSO384G0702 Papaver somniferum HOM05D007826 ORTHO05D009921 2.6e-06 56.6 44 56.8
Gohir.D06G184100 Gossypium hirsutum HOM05D007826 ORTHO05D009921 3.4e-06 56.2 44 59.1
Hma1.2p1_0233F.1_g098320 Hydrangea macrophylla HOM05D007826 ORTHO05D009921 3.4e-06 56.2 44 54.5
TPR.G9966 Trifolium pratense HOM05D007826 ORTHO05D009921 3.4e-06 56.2 44 54.5
arahy.Tifrunner.gnm1.ann1.46TCXF Arachis hypogaea HOM05D007826 ORTHO05D009921 4.4e-06 55.8 35 71.4
CiPaw.14G010600 Carya illinoinensis HOM05D007826 ORTHO05D009921 4.4e-06 55.8 63 46.0
CSS0030848 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 5.7e-06 55.5 44 54.5
CSS0043932 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 5.7e-06 55.5 44 54.5
GSVIVG01036583001 Vitis vinifera HOM05D007826 ORTHO05D009921 5.7e-06 55.5 35 68.6
arahy.Tifrunner.gnm1.ann1.B3NFFH Arachis hypogaea HOM05D007826 ORTHO05D009921 7.5e-06 55.1 35 65.7
Gorai.010G215500 Gossypium raimondii HOM05D007826 ORTHO05D009921 7.5e-06 55.1 44 59.1
MBI13_g00897_MAGBIO Magnolia biondii HOM05D007826 ORTHO05D009921 7.5e-06 55.1 35 71.4
Nn7g36978 Nelumbo nucifera HOM05D007826 ORTHO05D009921 7.5e-06 55.1 57 49.1
Hund15767 Selenicereus undatus HOM05D007826 ORTHO05D009921 7.5e-06 55.1 50 60.0
Ca_14209_v3 Cicer arietinum L. HOM05D007826 ORTHO05D009921 9.8e-06 54.7 48 50.0
Manes.04G155500 Manihot esculenta HOM05D007826 ORTHO05D009921 9.8e-06 54.7 62 43.5
Phvul.005G015800 Phaseolus vulgaris HOM05D007826 ORTHO05D009921 9.8e-06 54.7 42 52.4
Psat5g224040 Pisum sativum HOM05D007826 ORTHO05D009921 9.8e-06 54.7 44 52.3


User provided reference genes

Program Settings