Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb324810 Zea mays HOM05D052934 ORTHO05D442320 4.0e-75 284.6 141 100.0
Zm00001eb083360 Zea mays HOM05D052934 ORTHO05D442538 2.8e-52 208.8 107 97.2
Zm00001eb196450 Zea mays HOM05D004225 ORTHO05D004728 7.2e-08 61.2 31 96.8
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 1.2e-07 60.5 40 70.0
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.0e-06 57.4 38 65.8
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.0e-06 57.4 38 68.4
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.4e-06 57.0 38 68.4
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.8e-06 56.6 38 65.8
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.8e-06 56.6 38 65.8
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.8e-06 56.6 38 65.8
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 66.7
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 63.9
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 69.4
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 69.4
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 69.4
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 3.0e-06 55.8 38 63.2
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 3.0e-06 55.8 36 66.7
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 4.0e-06 55.5 36 69.4
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 4.0e-06 55.5 36 66.7
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 5.2e-06 55.1 36 72.2
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 5.2e-06 55.1 36 63.9
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 5.2e-06 55.1 38 63.2
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 6.7e-06 54.7 37 64.9
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 6.7e-06 54.7 36 66.7
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 6.7e-06 54.7 36 69.4
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 6.7e-06 54.7 36 66.7
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 63.9
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 63.9
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 63.9
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 63.9
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 66.7
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 8.8e-06 54.3 38 63.2
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 8.8e-06 54.3 36 61.1


User provided reference genes

Program Settings