Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb324350 Zea mays HOM05D000905 ORTHO05D015695 6.4e-58 227.3 118 100.0
Zm00001eb023470 Zea mays HOM05D000905 ORTHO05D015695 2.3e-44 182.2 98 96.9
Zm00001eb371780 Zea mays HOM05D000905 ORTHO05D000749 5.8e-43 177.6 97 94.8
Zm00001eb280060 Zea mays HOM05D000905 ORTHO05D000749 5.2e-36 154.5 99 84.8
Zm00001eb144750 Zea mays HOM05D000228 ORTHO05D015695 1.5e-35 152.9 99 83.8
Zm00001eb321810 Zea mays HOM05D000905 ORTHO05D015695 1.7e-34 149.4 99 81.8
Zm00001eb271670 Zea mays HOM05D000739 ORTHO05D015695 3.9e-31 138.3 94 78.7
Os06g0244700 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 1.7e-26 122.9 96 68.8
Os02g0739900 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 1.4e-17 93.2 97 54.6
Zm00001eb277980 Zea mays HOM05D000905 ORTHO05D000749 1.2e-16 90.1 45 100.0
Zm00001eb254080 Zea mays HOM05D000905 ORTHO05D000749 2.1e-16 89.4 97 56.7
Zm00001eb377230 Zea mays HOM05D000905 ORTHO05D015695 5.1e-15 84.7 48 85.4
Zm00001eb240800 Zea mays HOM05D000905 ORTHO05D015695 2.9e-10 68.9 87 48.3
Prupe.1G262400 Prunus persica HOM05D000905 ORTHO05D000749 7.1e-09 64.3 81 48.1
TAR629G0333 Trochodendron aralioides HOM05D000905 ORTHO05D000749 1.6e-08 63.2 90 45.6
MBI15_g14834_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 3.5e-08 62.0 93 44.1
HPP92_017355 Vanilla planifolia HOM05D000905 ORTHO05D000749 3.5e-08 62.0 81 45.7
Nn3g17052 Nelumbo nucifera HOM05D000905 ORTHO05D000749 2.3e-07 59.3 94 43.6
Potri.010G038900 Populus trichocarpa HOM05D000905 ORTHO05D000749 2.3e-07 59.3 82 45.1
Dinv24927 Davidia involucrata HOM05D000905 ORTHO05D000749 3.0e-07 58.9 81 45.7
Haze_12114 Corylus avellana HOM05D000905 ORTHO05D000749 5.1e-07 58.2 102 39.2
FAN08G2607 Fragaria x ananassa HOM05D000905 ORTHO05D000749 6.7e-07 57.8 93 39.8
Sabra08G0145600 Salix brachista HOM05D000905 ORTHO05D000749 6.7e-07 57.8 100 41.0
TAR371G0402 Trochodendron aralioides HOM05D000905 ORTHO05D000749 6.7e-07 57.8 95 41.1
vmacro16301 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 6.7e-07 57.8 94 40.4
Nn4g22959 Nelumbo nucifera HOM05D000905 ORTHO05D000749 1.1e-06 57.0 93 43.0
Actinidia14985 Actinidia chinensis HOM05D000905 ORTHO05D000749 1.5e-06 56.6 91 40.7
Ca_05077_v3 Cicer arietinum L. HOM05D000905 ORTHO05D000749 1.5e-06 56.6 89 38.2
Aqoxy3G03163 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 1.9e-06 56.2 81 45.7
Cfa009082 Carpinus fangiana HOM05D000905 ORTHO05D000749 1.9e-06 56.2 94 40.4
GSVIVG01007847001 Vitis vinifera HOM05D000905 ORTHO05D000749 1.9e-06 56.2 90 44.4
Hma1.2p1_0289F.1_g114530 Hydrangea macrophylla HOM05D000905 ORTHO05D000749 2.5e-06 55.8 89 41.6
Lj9C455T6 Lonicera japonica HOM05D000905 ORTHO05D000749 2.5e-06 55.8 89 43.8
PGR044G2393 Punica granatum HOM05D000905 ORTHO05D000749 2.5e-06 55.8 80 46.2
CANSAT80G0025 Cannabis sativa HOM05D000905 ORTHO05D000749 3.3e-06 55.5 95 40.0
Gohir.D03G089500 Gossypium hirsutum HOM05D000905 ORTHO05D000749 3.3e-06 55.5 96 44.8
Gorai.003G071900 Gossypium raimondii HOM05D000905 ORTHO05D000749 3.3e-06 55.5 96 44.8
Gohir.A03G076200 Gossypium hirsutum HOM05D000905 ORTHO05D000749 4.3e-06 55.1 96 44.8
Zm00001eb228880 Zea mays HOM05D000905 ORTHO05D015695 4.3e-06 55.1 60 51.7
Dinv31138 Davidia involucrata HOM05D000905 ORTHO05D000749 5.6e-06 54.7 90 43.3
MD13G1084500 Malus domestica HOM05D000905 ORTHO05D000749 5.6e-06 54.7 81 40.7
QL03p067468 Quercus lobata HOM05D000905 ORTHO05D000749 5.6e-06 54.7 90 40.0
TAR374G1378 Trochodendron aralioides HOM05D000905 ORTHO05D000749 5.6e-06 54.7 90 43.3
RcHm_v2.0_Chr7g0179911 Rosa chinensis HOM05D000905 ORTHO05D000749 7.4e-06 54.3 91 39.6
Sed0017175 Sechium edule HOM05D000905 ORTHO05D000749 7.4e-06 54.3 96 39.6
Atru.chr11.1924 Acer truncatum HOM05D000905 ORTHO05D000749 9.6e-06 53.9 88 43.2
Glyma.01G038400 Glycine max HOM05D000905 ORTHO05D000749 9.6e-06 53.9 89 39.3
Prupe.5G181300 Prunus persica HOM05D000905 ORTHO05D000749 9.6e-06 53.9 95 38.9
Sabra10G0027500 Salix brachista HOM05D000905 ORTHO05D000749 9.6e-06 53.9 94 40.4


User provided reference genes

Program Settings