Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb323150 Zea mays HOM05D035907 ORTHO05D004706 1.2e-81 306.6 177 100.0
Zm00001eb106250 Zea mays HOM05D035907 ORTHO05D004706 6.6e-43 177.9 155 72.3
Os07g0530700 Oryza sativa ssp. japonica HOM05D035907 ORTHO05D004706 4.8e-41 171.8 188 60.1
Os01g0787400 Oryza sativa ssp. japonica HOM05D033938 ORTHO05D004706 5.1e-11 72.0 163 37.4
Zm00001eb369720 Zea mays HOM05D033938 ORTHO05D004706 3.1e-08 62.8 93 47.3
ATR0762G059 Amborella trichopoda HOM05D009517 ORTHO05D011612 2.0e-07 60.1 166 36.1
HPP92_001786 Vanilla planifolia HOM05D033938 ORTHO05D004706 2.0e-07 60.1 85 47.1
Zm00001eb066620 Zea mays HOM05D009517 ORTHO05D011612 2.6e-07 59.7 124 37.1
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 4.5e-07 58.9 140 34.3
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.5e-07 58.9 137 33.6
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.5e-07 58.9 116 33.6
Gohir.D10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.5e-07 58.9 119 34.5
Gorai.011G017100 Gossypium raimondii HOM05D004361 ORTHO05D004706 4.5e-07 58.9 119 34.5
Haze_06732 Corylus avellana HOM05D004361 ORTHO05D004706 5.9e-07 58.5 134 35.1
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 7.7e-07 58.2 131 35.1
Haze_06736 Corylus avellana HOM05D004361 ORTHO05D004706 1.0e-06 57.8 134 35.1
MBI18_g06808_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.0e-06 57.8 69 49.3
arahy.Tifrunner.gnm1.ann1.Y6FWJK Arachis hypogaea HOM05D004361 ORTHO05D004706 1.3e-06 57.4 131 34.4
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 1.3e-06 57.4 128 34.4
Cc00_g17930 Coffea canephora HOM05D004361 ORTHO05D004706 1.3e-06 57.4 141 34.8
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 1.3e-06 57.4 98 37.8
arahy.Tifrunner.gnm1.ann1.QUZ1HU Arachis hypogaea HOM05D004361 ORTHO05D004706 2.9e-06 56.2 129 34.9
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 2.9e-06 56.2 135 32.6
QL05p075222 Quercus lobata HOM05D004361 ORTHO05D004706 3.8e-06 55.8 130 32.3
vmacro03710 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 3.8e-06 55.8 78 46.2
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 5.0e-06 55.5 90 40.0
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 5.0e-06 55.5 39 64.1
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 6.5e-06 55.1 49 53.1
Nn1g03641 Nelumbo nucifera HOM05D004361 ORTHO05D004706 8.5e-06 54.7 41 68.3


User provided reference genes

Program Settings