Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 4.0e-279 964.1 491 100.0
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.4e-186 656.8 519 70.7
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 9.7e-161 570.9 341 87.7
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.4e-87 327.8 554 41.3
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 8.2e-83 312.0 547 39.3
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 2.4e-82 310.5 548 39.2
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 4.1e-82 309.7 499 41.7
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 5.3e-82 309.3 512 42.4
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.3e-80 304.7 515 40.4
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.3e-80 304.7 556 39.2
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 2.2e-80 303.9 541 39.9
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.2e-80 303.9 546 39.7
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.0e-80 302.8 500 40.4
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 3.2e-79 300.1 528 39.4
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 5.5e-79 299.3 517 41.0
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 9.3e-79 298.5 541 39.9
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-78 297.7 517 40.4
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-78 297.7 517 40.8
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.7e-78 297.0 517 41.4
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 4.6e-78 296.2 505 40.4
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 4.6e-78 296.2 546 39.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 4.6e-78 296.2 498 40.6
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 6.1e-78 295.8 515 39.6
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 7.9e-78 295.4 525 40.0
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.0e-77 295.0 514 40.1
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.3e-77 294.7 513 39.4
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.3e-77 294.7 513 39.4
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.8e-77 294.3 531 38.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 3.9e-77 293.1 539 39.0
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.9e-77 293.1 539 39.3
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.1e-77 292.7 513 39.4
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 8.7e-77 292.0 482 40.2
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.9e-76 290.8 533 39.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.5e-76 290.4 531 38.4
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 3.3e-76 290.0 503 40.4
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 3.3e-76 290.0 546 39.7
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.3e-76 290.0 514 40.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.3e-76 290.0 521 39.5
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 5.7e-76 289.3 504 40.1
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 9.7e-76 288.5 506 38.9
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-75 288.1 525 39.2
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.6e-75 287.7 517 39.5
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 3.7e-75 286.6 513 39.0
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 6.3e-75 285.8 521 39.2
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 8.2e-75 285.4 517 39.7
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.4e-74 284.6 518 39.0
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.4e-74 284.6 515 38.8
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 5.3e-74 282.7 553 39.1
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 6.9e-74 282.3 542 39.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 6.9e-74 282.3 532 37.8
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 6.9e-74 282.3 513 37.8
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 5.9e-73 279.3 514 39.3
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 7.7e-73 278.9 533 38.3
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.9e-72 276.9 513 39.0
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 6.5e-72 275.8 490 39.8
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 8.5e-72 275.4 556 37.2
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 9.4e-71 271.9 544 38.8
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 9.4e-71 271.9 544 38.8
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.7e-70 270.4 542 35.8
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.1e-70 269.2 498 39.0
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 3.0e-69 266.9 507 37.3
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 5.1e-69 266.2 515 38.3
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.7e-69 265.8 546 36.4
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 3.3e-68 263.5 534 35.4
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 9.7e-68 261.9 503 39.0
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.7e-67 261.2 552 34.2
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.7e-67 261.2 523 36.9
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.8e-67 260.4 513 38.4
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 6.3e-67 259.2 460 40.2
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 6.3e-67 259.2 441 39.9
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.4e-66 258.1 506 37.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.8e-66 257.7 501 38.3
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 7.7e-65 252.3 483 38.3
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.9e-64 250.4 472 38.1
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 5.0e-64 249.6 460 38.0
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 5.0e-64 249.6 506 36.0
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.4e-63 248.1 479 37.8
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 9.4e-63 245.4 442 39.8
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.8e-61 241.1 488 35.5
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 2.3e-61 240.7 522 36.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.7e-61 239.2 509 35.4
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-60 237.7 513 37.0
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 9.7e-60 235.3 516 35.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 6.3e-59 232.6 515 36.5
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.0e-58 229.2 432 40.7
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.5e-57 226.9 499 35.9
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 6.5e-56 222.6 519 34.9
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.4e-53 214.9 515 34.8
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 3.3e-52 210.3 468 35.0
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 2.7e-49 200.7 429 37.1
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.7e-48 198.0 390 39.2
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 3.8e-48 196.8 503 34.8
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.4e-44 183.7 457 33.9
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 4.4e-44 183.3 531 31.8
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 4.8e-43 179.9 494 33.2
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 6.3e-43 179.5 242 45.5
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.4e-42 178.3 530 30.8
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.0e-40 172.2 296 39.5
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 5.0e-40 169.9 316 38.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 8.5e-40 169.1 539 29.1
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.9e-39 167.9 515 31.1
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 9.4e-39 165.6 513 31.0
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.6e-38 164.9 338 36.4
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 3.4e-36 157.1 299 37.8
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.7e-35 154.8 441 32.2
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.1e-34 152.1 186 47.8
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 3.5e-33 147.1 181 44.8
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 3.3e-31 140.6 514 28.0
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.8e-26 124.8 238 37.4
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 3.6e-22 110.5 128 47.7
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.2e-20 105.5 623 23.8
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.2e-19 101.3 513 24.6
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 9.5e-15 85.9 89 48.3


User provided reference genes

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