Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb320410 Zea mays HOM05D005534 ORTHO05D006642 2.7e-88 328.6 159 100.0
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 2.2e-69 265.8 137 94.9
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 1.6e-51 206.5 140 71.4
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 2.7e-51 205.7 137 73.0
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 7.8e-51 204.1 137 73.0
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 7.8e-51 204.1 138 71.7
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 1.7e-50 203.0 138 71.7
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 2.9e-50 202.2 139 71.9
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 2.9e-50 202.2 138 71.7
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 5.0e-50 201.4 138 69.6
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 5.0e-50 201.4 140 70.7
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 6.6e-50 201.1 138 68.8
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 6.6e-50 201.1 138 72.5
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 8.6e-50 200.7 134 74.6
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 1.1e-49 200.3 133 73.7
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 1.1e-49 200.3 137 70.1
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 1.1e-49 200.3 138 71.7
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 1.1e-49 200.3 138 70.3
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.5e-49 199.9 138 71.7
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 1.5e-49 199.9 138 71.0
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 1.5e-49 199.9 134 73.1
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 1.9e-49 199.5 134 71.6
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 1.9e-49 199.5 138 71.0
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 2.5e-49 199.1 138 71.7
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 2.5e-49 199.1 138 68.1
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 2.5e-49 199.1 138 68.1
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 2.5e-49 199.1 138 70.3
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 3.3e-49 198.7 138 71.0
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 3.3e-49 198.7 137 69.3
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 3.3e-49 198.7 138 68.1
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 3.3e-49 198.7 138 71.0
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 4.3e-49 198.4 138 68.1
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 4.3e-49 198.4 138 70.3
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 5.6e-49 198.0 138 71.7
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 5.6e-49 198.0 138 70.3
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 1.2e-48 196.8 138 68.8
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 1.2e-48 196.8 138 69.6
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 1.6e-48 196.4 137 70.8
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 1.6e-48 196.4 134 73.1
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 2.1e-48 196.1 138 69.6
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.1e-48 196.1 138 68.1
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.8e-48 195.7 138 71.0
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 2.8e-48 195.7 138 68.8
Os12g0203100 Oryza sativa ssp. japonica HOM05D005534 ORTHO05D006642 2.8e-48 195.7 116 81.0
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 3.6e-48 195.3 138 68.8
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 3.6e-48 195.3 134 71.6
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 3.6e-48 195.3 137 69.3
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 4.7e-48 194.9 136 70.6
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 4.7e-48 194.9 135 71.1
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 4.7e-48 194.9 137 67.2
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 6.2e-48 194.5 137 68.6
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 6.2e-48 194.5 139 68.3
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 8.0e-48 194.1 131 71.0
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 1.0e-47 193.7 139 66.9
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 1.4e-47 193.4 137 67.9
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 1.4e-47 193.4 138 67.4
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 2.3e-47 192.6 138 66.7
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 2.3e-47 192.6 135 70.4
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 2.3e-47 192.6 138 68.8
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 3.1e-47 192.2 135 69.6
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 3.1e-47 192.2 138 67.4
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 3.1e-47 192.2 138 67.4
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 3.1e-47 192.2 138 67.4
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 3.1e-47 192.2 138 67.4
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 4.0e-47 191.8 136 68.4
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 5.2e-47 191.4 137 67.9
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 5.2e-47 191.4 138 65.9
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 6.8e-47 191.0 135 68.9
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 6.8e-47 191.0 134 70.1
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 1.2e-46 190.3 137 67.9
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 2.0e-46 189.5 135 68.9
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 2.6e-46 189.1 137 67.2
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 3.4e-46 188.7 138 65.2
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 7.5e-46 187.6 134 68.7
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 9.8e-46 187.2 135 67.4
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 4.9e-45 184.9 138 66.7
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 4.9e-45 184.9 138 65.2
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 4.9e-45 184.9 138 65.2
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 1.4e-44 183.3 134 66.4
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 3.2e-44 182.2 137 63.5
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 4.1e-44 181.8 134 64.2
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 9.2e-44 180.6 138 64.5
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 2.7e-43 179.1 137 66.4
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 6.0e-43 177.9 138 63.8
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 7.8e-43 177.6 138 63.8
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 1.1e-41 173.7 139 62.6
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 1.5e-41 173.3 138 60.1
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 3.3e-41 172.2 139 61.9
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 6.2e-40 167.9 135 63.7
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 1.1e-39 167.2 137 62.8
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 4.0e-39 165.2 137 59.1
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 6.8e-39 164.5 134 62.7
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 6.8e-39 164.5 134 62.7
CANSAT25G1946 Cannabis sativa HOM05D005534 ORTHO05D006642 1.2e-38 163.7 119 64.7
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 1.2e-38 163.7 137 59.9
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 9.8e-38 160.6 142 53.5
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 7.1e-36 154.5 144 52.8
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 1.2e-35 153.7 145 53.8
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 7.3e-33 144.4 135 51.9
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 2.0e-30 136.3 143 50.3
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 2.6e-30 136.0 144 49.3
Hma1.2p1_0708F.1_g207130 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 2.9e-29 132.5 92 70.7
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 3.7e-29 132.1 94 69.1
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 1.4e-28 130.2 92 69.6
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.4e-28 129.4 92 68.5
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 3.2e-28 129.0 92 69.6
Lj1A297T60 Lonicera japonica HOM05D005534 ORTHO05D006642 4.1e-28 128.6 92 68.5
SEGI_21404 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 5.4e-28 128.3 92 69.6
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 6.0e-27 124.8 137 49.6
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 2.3e-26 122.9 123 51.2
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 2.0e-22 109.8 120 51.7
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 1.9e-20 103.2 142 41.5
Glyma.04G256001 Glycine max HOM05D005534 ORTHO05D006642 2.7e-19 99.4 114 50.0
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 1.0e-18 97.4 81 60.5
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.3e-18 97.1 78 62.8
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 2.3e-18 96.3 82 58.5
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 8.7e-18 94.4 86 53.5
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 1.9e-17 93.2 58 72.4
A07p14200 Brassica napus HOM05D002040 ORTHO05D006642 6.4e-13 78.2 79 50.6
Lsat_1_v5_gn_2_74121 Lactuca sativa HOM05D000236 ORTHO05D000192 3.5e-11 72.4 40 77.5
CSS0018807 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 4.6e-11 72.0 141 36.2
FAN08G1090 Fragaria x ananassa HOM05D005534 ORTHO05D006642 6.0e-11 71.6 46 69.6
SEGI_02632 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 1.3e-10 70.5 65 53.8
CSS0033231 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 6.2e-08 61.6 105 41.0
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 1.1e-07 60.8 60 45.0


User provided reference genes

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