Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 6.2e-177 624.0 313 100.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 9.1e-112 407.5 203 97.0
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.5e-103 379.0 204 88.2
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 7.5e-90 334.7 203 78.8
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 7.5e-90 334.7 203 77.8
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.1e-88 329.3 203 75.9
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 9.2e-88 327.8 203 75.9
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.2e-87 327.4 203 76.4
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.0e-87 326.6 201 78.1
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 2.7e-87 326.2 203 76.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 3.5e-87 325.9 203 76.4
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.5e-87 325.9 203 76.4
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 3.5e-87 325.9 201 75.6
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 3.5e-87 325.9 201 75.1
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 5.9e-87 325.1 201 77.6
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 5.9e-87 325.1 203 76.8
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.8e-87 324.7 201 75.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 7.8e-87 324.7 203 75.9
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 7.8e-87 324.7 201 76.6
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 7.8e-87 324.7 201 75.6
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.0e-86 324.3 203 76.4
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.0e-86 324.3 201 75.6
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.3e-86 323.2 203 74.9
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 2.3e-86 323.2 203 74.9
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.9e-86 322.8 203 75.9
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 2.9e-86 322.8 201 76.6
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 3.8e-86 322.4 201 77.1
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 3.8e-86 322.4 203 73.9
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 8.6e-86 321.2 203 73.9
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.1e-85 320.9 201 73.6
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.5e-85 320.5 203 73.9
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.5e-85 320.5 201 75.6
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.5e-85 320.5 201 73.6
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.9e-85 320.1 201 76.6
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.9e-85 320.1 201 76.6
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.9e-85 320.1 201 75.6
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.5e-85 319.7 201 75.6
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.5e-85 319.7 201 76.1
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 5.6e-85 318.5 201 76.1
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 7.3e-85 318.2 203 74.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 7.3e-85 318.2 201 76.1
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 7.3e-85 318.2 201 75.1
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 9.5e-85 317.8 201 73.6
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.2e-84 317.4 203 74.4
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.6e-84 317.0 203 72.9
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.8e-84 316.2 201 75.6
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 3.6e-84 315.8 200 72.0
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.7e-84 315.5 201 73.1
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 6.1e-84 315.1 201 73.6
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 8.0e-84 314.7 201 73.1
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.0e-83 314.3 200 72.5
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-83 313.9 201 72.6
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.4e-83 313.9 201 72.1
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.8e-83 313.5 201 72.6
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.3e-83 313.2 203 71.4
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 4.0e-83 312.4 200 71.5
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.0e-83 312.4 201 72.1
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.0e-83 312.4 203 71.9
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.2e-83 312.0 201 72.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 5.2e-83 312.0 201 72.6
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 5.2e-83 312.0 200 73.0
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.2e-83 312.0 203 72.4
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 6.8e-83 311.6 203 72.9
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 8.9e-83 311.2 201 70.1
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.2e-82 310.8 201 72.1
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.5e-82 310.5 201 72.1
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.5e-82 310.5 203 71.9
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.5e-82 310.5 201 73.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.0e-82 310.1 201 71.6
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.6e-82 309.7 203 71.4
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.6e-82 309.7 203 71.4
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.6e-82 309.7 201 72.6
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.4e-82 309.3 203 71.4
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 4.4e-82 308.9 201 72.1
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 2.2e-81 306.6 203 71.9
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.9e-81 305.4 203 71.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.4e-80 303.9 212 68.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.4e-80 303.1 203 68.5
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.4e-80 303.1 203 70.0
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.1e-80 302.4 201 68.7
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 4.1e-80 302.4 203 70.0
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.1e-80 302.4 203 70.0
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-79 299.3 203 69.0
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.0e-78 297.7 203 70.4
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.7e-78 297.0 203 68.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 8.6e-78 294.7 152 93.4
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 5.6e-77 292.0 201 67.7
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.3e-77 291.6 201 67.2
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.1e-76 290.0 203 68.0
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.1e-75 287.7 192 76.0
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.0e-75 285.8 247 60.7
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 2.0e-74 283.5 203 66.5
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 6.0e-71 271.9 201 62.7
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.7e-70 270.4 262 52.3
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.1e-68 263.5 201 63.7
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.3e-67 260.0 203 62.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.8e-67 258.5 196 61.2
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.8e-67 258.5 196 61.2
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.5e-66 257.3 195 64.6
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.8e-66 255.4 195 63.1
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.9e-53 213.8 143 70.6
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.3e-49 201.1 116 78.4
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-46 191.0 127 70.9
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 3.3e-45 186.4 201 43.8
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 6.2e-44 182.2 192 47.4
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 5.8e-42 175.6 89 92.1
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 5.8e-42 175.6 89 92.1
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.3e-41 174.5 118 71.2
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 3.2e-40 169.9 124 66.1
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.5e-37 160.2 81 93.8
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.8e-34 149.1 101 68.3
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 4.2e-32 142.9 100 67.0
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 5.3e-27 125.9 79 70.9
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-25 121.3 71 81.7
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 4.8e-20 102.8 116 46.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 1.8e-19 100.9 75 65.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 4.6e-15 86.3 56 76.8
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.4e-10 70.1 123 31.7
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 6.5e-09 65.9 45 62.2
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.2e-07 61.6 41 61.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.9e-07 58.9 53 54.7


User provided reference genes

Program Settings